CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000347301
(
Ascaris lumbricoides
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
ALUE_0000347301
T199668_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000347301-mRNA-1
Grainyhead
175
400
YNNSEVIHGIAERPERALSHRDSPIVIPKLENSLGFQYVLEAPISTSVRKEDDRMTYVNKGQFYTVSLDYIPDLCKPLKSATVKSQLMIVFREDKTYDEEIKTWQFWHSRQHSVKQRILEIDSKNSSGMIGQIEEIAHNAVQFYWNPTEQSSVKISIAVQCLSTDFSNQKGVKGLPLHIQIDTYDENENSEVLFHRGYCQIKVFCDKGAERKLRDEDKRAQKRKLA
Links
Other
Grainyhead
family TFs
Other
Ascaris lumbricoides
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.808
GPUH_0000076201
Gongylonema pulchrum
GPUH_0000076201
N
0.819
TMUE_s0040003800
Trichuris muris
TMUE_s0040003800
N
0.710
TMUE_s0024003700
Trichuris muris
TMUE_s0024003700
N
0.706
TELCIR_08176
Teladorsagia circumcincta
TELCIR_08176
N
0.833
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.882
SSTP_0000594700
Strongyloides stercoralis
SSTP_0000594700
N
0.769
SPAL_0001441800
Strongyloides papillosus
SPAL_0001441800
N
0.778
SMUV_0000990001
Syphacia muris
SMUV_0000990001
N
0.914
RSKR_0000378600
Rhabditophanes kr3021
RSKR_0000378600
N
0.760
PTRK_0001384100
Parastrongyloides trichosuri
PTRK_0001384100
N
0.810
nLs.2.1.2.g09328
Litomosoides sigmodontis
nLs.2.1.2.g09328
N
0.851
NECAME_01451
Necator americanus
NECAME_01451
N
0.828
nDi.2.2.2.g12190
Dirofilaria immitis
nDi.2.2.2.g12190
N
0.829
nAv.1.0.1.g04294
Acanthocheilonema viteae
nAv.1.0.1.g04294
N
0.851
HPLM_0001248301
Haemonchus placei
HPLM_0001248301
N
0.833
Bm6679
Brugia malayi
Bm6679
N
0.819
DME_0000295201
Dracunculus medinensis
DME_0000295201
N
0.851
DICVIV_02142
Dictyocaulus viviparus
DICVIV_02142
N
0.787
D918_02299
Trichuris suis
D918_02299
N
0.712
ASU_10686
Ascaris suum
ASU_10686
N
1.000
ASIM_0001085501
Anisakis simplex
ASIM_0001085501
N
0.986
ANCCEY_13935
Ancylostoma ceylanicum
ANCCEY_13935
N
0.756
ANCCAN_14716
Ancylostoma caninum
ANCCAN_14716
N
0.783
ACOC_0000493901
Angiostrongylus costaricensis
ACOC_0000493901
N
0.833
WBGene00238278
Onchocerca volvulus
WBGene00238278
N
0.860
grh-1
Caenorhabditis elegans
WBGene00001707
N
0.787
CRE28107
Caenorhabditis remanei
CRE28107
N
0.774
CJA15586
Caenorhabditis japonica
CJA15586
N
0.706
CBN22200
Caenorhabditis brenneri
CBN22200
N
0.778
CBG08484
Caenorhabditis briggsae
CBG08484
N
0.787