GPLIN_001553300 (Globodera pallida)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 GPLIN_001553300 T199693_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001553300 Grainyhead 129 211

Links

Other Grainyhead family TFs
Other Globodera pallida TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N
Cla019628 Citrullus lanatus Cla019628 N
Pm010795 Prunus mume Pm010795 N
29417.m000034 Ricinus communis 29417.m000034 N
Cucsa.048750 Cucumis sativus Cucsa.048750 N
Cucsa.134530 Cucumis sativus Cucsa.134530 N
mgf021599m Mimulus guttatus mgf021599m N
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N
Carubv10011663m.g Capsella rubella Carubv10011663m.g N
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N
Cla010042 Citrullus lanatus Cla010042 N
Lus10036226.g Linum usitatissimum Lus10036226.g N
Lus10038365.g Linum usitatissimum Lus10038365.g N
MDP0000197021 Malus domestica MDP0000197021 N
MDP0000891068 Malus domestica MDP0000891068 N
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N
PK04104.1 Cannabis sativa PK04104.1 N
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N
Bo2g121040 Brassica oleracea Bo2g121040 N
Bo7g041160 Brassica oleracea Bo7g041160 N
Bra014899 Brassica rapa Bra014899 N
Bra038403 Brassica rapa Bra038403 N
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N
GLYMA05G26271 Glycine max GLYMA05G26271 N
GLYMA08G09191 Glycine max GLYMA08G09191 N
GLYMA09G05781 Glycine max GLYMA09G05781 N
GLYMA15G17040 Glycine max GLYMA15G17040 N
GRMZM2G017882 Zea mays GRMZM2G017882 N
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N
AT1G31040 Arabidopsis thaliana AT1G31040 N
OB02G14750 Oryza brachyantha OB02G14750 N
OPUNC02G04680 Oryza punctata OPUNC02G04680 N
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N
Si018139m.g Setaria italica Si018139m.g N
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N
TCM_006017 Theobroma cacao TCM_006017 N
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N
TRIUR3_33737 Triticum urartu TRIUR3_33737 N
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N