Carubv10011663m.g (Capsella rubella)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Carubv10011663m.g T315987_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011663m PLATZ 73 143

Links

Other PLATZ family TFs
Other Capsella rubella TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g041160 Brassica oleracea Bo7g041160 N 1.000
Bra014899 Brassica rapa Bra014899 N 1.000
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 1.000
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 1.000
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 1.000
Bo2g121040 Brassica oleracea Bo2g121040 N 0.986
Bra038403 Brassica rapa Bra038403 N 0.986
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.986
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.972
29417.m000034 Ricinus communis 29417.m000034 N 0.889
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.875
TCM_006017 Theobroma cacao TCM_006017 N 0.875
Cla010042 Citrullus lanatus Cla010042 N 0.875
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.875
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.875
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.861
Si018139m.g Setaria italica Si018139m.g N 0.847
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.847
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.847
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.847
PK04104.1 Cannabis sativa PK04104.1 N 0.847
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.845
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.845
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.845
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.836
Pm010795 Prunus mume Pm010795 N 0.836
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.833
OB02G14750 Oryza brachyantha OB02G14750 N 0.833
OBART02G05520 Oryza barthii OBART02G05520 N 0.833
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.833
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.833
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.833
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.833
OS02G0172800 Oryza sativa OS02G0172800 N 0.833
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.833
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.833
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.833
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.833
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.831
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.819
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.819
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.819
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.819
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.819
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.819
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.819
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.819
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.819
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.819
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.817
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.817
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.817
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.806
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.806
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.806
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.806
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.806
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.806
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.803
PK19037.1 Cannabis sativa PK19037.1 N 0.800
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.792
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.792
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.792
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.792
OBART06G24000 Oryza barthii OBART06G24000 N 0.792
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.792
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.792
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.792
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.792
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.792
OS06G0666100 Oryza sativa OS06G0666100 N 0.792
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.792
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.792
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.789
MDP0000891068 Malus domestica MDP0000891068 N 0.787
Cla019628 Citrullus lanatus Cla019628 N 0.784
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.784
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.778
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.775
MDP0000197021 Malus domestica MDP0000197021 N 0.773
F775_02274 Aegilops tauschii F775_02274 N 0.764
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.764
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.764
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.756
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.750
Si007394m.g Setaria italica Si007394m.g N 0.750
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.750
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.743
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.741
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.736
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.736
30090.m000247 Ricinus communis 30090.m000247 N 0.736
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.736
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.732
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.730
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.727
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.722
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.722
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.722
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.722
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.722
Ca_06740 Cicer arietinum Ca_06740 N 0.722
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.722
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.722
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.722
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.722
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.718
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.718
Pm027672 Prunus mume Pm027672 N 0.718
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.718
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.708
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.708
TCM_038233 Theobroma cacao TCM_038233 N 0.708
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.708
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.708
Aquca_030_00325 Aquilegia coerulea Aquca_030_00325 N 0.708
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.708
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.708
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.708
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.708
MDP0000639526 Malus domestica MDP0000639526 N 0.708
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.708
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.708
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.708
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.705