Pavir.Da00255 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Da00255 T316140_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da00255.1.p PLATZ 21 92

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.986
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.972
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.972
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.972
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.958
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.958
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.958
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.944
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.944
OB02G14750 Oryza brachyantha OB02G14750 N 0.944
OBART06G24000 Oryza barthii OBART06G24000 N 0.944
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.944
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.944
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.944
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.944
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.944
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.944
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.944
OS06G0666100 Oryza sativa OS06G0666100 N 0.944
Si007394m.g Setaria italica Si007394m.g N 0.942
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.931
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.931
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.931
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.917
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.917
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.917
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.917
OBART02G05520 Oryza barthii OBART02G05520 N 0.917
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.917
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.917
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.917
OS02G0172800 Oryza sativa OS02G0172800 N 0.917
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.917
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.903
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.903
Si018139m.g Setaria italica Si018139m.g N 0.903
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.903
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.903
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.889
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.889
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.889
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.889
F775_02274 Aegilops tauschii F775_02274 N 0.861
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.861
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.861
29417.m000034 Ricinus communis 29417.m000034 N 0.819
Cla010042 Citrullus lanatus Cla010042 N 0.806
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.806
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.806
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.803
Bo7g041160 Brassica oleracea Bo7g041160 N 0.803
Bra014899 Brassica rapa Bra014899 N 0.803
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.803
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.803
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.803
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.803
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.792
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.792
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.792
Bo2g121040 Brassica oleracea Bo2g121040 N 0.789
Bra038403 Brassica rapa Bra038403 N 0.789
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.789
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.778
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.778
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.778
TCM_006017 Theobroma cacao TCM_006017 N 0.778
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.778
PK04104.1 Cannabis sativa PK04104.1 N 0.778
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.778
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.764
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.764
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.764
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.753
Pm010795 Prunus mume Pm010795 N 0.753
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.750
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.750
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.750
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.750
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.750
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.750
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.750
PK19037.1 Cannabis sativa PK19037.1 N 0.750
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.736
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.736
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.736
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.736
30090.m000247 Ricinus communis 30090.m000247 N 0.736
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.736
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.736
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.736
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.722
Bo3g087070 Brassica oleracea Bo3g087070 N 0.722
Bra013149 Brassica rapa Bra013149 N 0.722
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.722
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.722
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.722
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.722
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.722
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.722
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.722
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.722
OB02G15630 Oryza brachyantha OB02G15630 N 0.722
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.722
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.722
OS02G0183000 Oryza sativa OS02G0183000 N 0.722
Si019544m.g Setaria italica Si019544m.g N 0.722
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.722
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.722
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.722
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.722
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.722
Ca_06740 Cicer arietinum Ca_06740 N 0.722
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.722
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.722
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.722
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.722
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.722
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.722
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.722
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.722
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.718
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.708
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.708
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.708
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.708
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.708
TCM_038233 Theobroma cacao TCM_038233 N 0.708
Pm027672 Prunus mume Pm027672 N 0.708
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.708
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.708
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.708
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.708
MDP0000639526 Malus domestica MDP0000639526 N 0.708
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.708
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.708
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.708
MDP0000891068 Malus domestica MDP0000891068 N 0.707
Cla019628 Citrullus lanatus Cla019628 N 0.703
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.703
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.703