AMTR_s00059p00116150 (Amborella trichopoda)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 AMTR_s00059p00116150 T315200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN17545 PLATZ 62 133

Links

Other PLATZ family TFs
Other Amborella trichopoda TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.847
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.833
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.833
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.833
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.819
PK01122.1 Cannabis sativa PK01122.1 N 0.819
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.819
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N 0.819
Si018139m.g Setaria italica Si018139m.g N 0.806
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.806
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N 0.806
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.806
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.806
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.806
Cla006768 Citrullus lanatus Cla006768 N 0.806
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.806
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.806
Cucsa.120560 Cucumis sativus Cucsa.120560 N 0.806
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.806
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.806
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.806
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.792
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.792
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.792
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.792
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N 0.792
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N 0.792
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.792
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.792
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.792
TCM_005554 Theobroma cacao TCM_005554 N 0.792
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.792
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.792
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.792
OS02G0172800 Oryza sativa OS02G0172800 N 0.778
30174.m008836 Ricinus communis 30174.m008836 N 0.778
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.778
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.778
OS06G0666100 Oryza sativa OS06G0666100 N 0.778
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.778
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.778
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.778
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.778
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.778
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.778
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.778
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.778
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.778
29417.m000034 Ricinus communis 29417.m000034 N 0.778
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.778
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.778
OBART02G05520 Oryza barthii OBART02G05520 N 0.778
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N 0.778
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.778
OB02G14750 Oryza brachyantha OB02G14750 N 0.778
OBART06G24000 Oryza barthii OBART06G24000 N 0.778
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.778
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.778
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.778
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.778
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.778
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.778
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.764
Pm017841 Prunus mume Pm017841 N 0.764
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.764
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.764
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.764
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.764
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.764
TCM_016018 Theobroma cacao TCM_016018 N 0.764
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N 0.764
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.750
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.750
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.750
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.750
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.750
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.750
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.750
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.750
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.750
Bo7g041160 Brassica oleracea Bo7g041160 N 0.750
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.750
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.750
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.750
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.750
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.750
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.750
OS02G0183000 Oryza sativa OS02G0183000 N 0.750
PK04104.1 Cannabis sativa PK04104.1 N 0.750
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.750
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.750
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.750
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.750
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.750
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.750
OB02G15630 Oryza brachyantha OB02G15630 N 0.750
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.750
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.750
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.750
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.750
Si019544m.g Setaria italica Si019544m.g N 0.750
Bra014899 Brassica rapa Bra014899 N 0.750
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.736
Cla010042 Citrullus lanatus Cla010042 N 0.736
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N 0.736
TCM_006017 Theobroma cacao TCM_006017 N 0.736
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.736
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.736
Eucgr.E01501 Eucalyptus grandis Eucgr.E01501 N 0.736
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.736
Bra038403 Brassica rapa Bra038403 N 0.736
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.736
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.736
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.736
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.736
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.736
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.736
Bo2g121040 Brassica oleracea Bo2g121040 N 0.736
Si007394m.g Setaria italica Si007394m.g N 0.731
MDP0000639526 Malus domestica MDP0000639526 N 0.722
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N 0.722
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.722
Lus10015881.g Linum usitatissimum Lus10015881.g N 0.722
Lus10009283.g Linum usitatissimum Lus10009283.g N 0.722
VIT_03s0063g02240 Vitis vinifera VIT_03s0063g02240 N 0.722
30090.m000247 Ricinus communis 30090.m000247 N 0.722
Pm027672 Prunus mume Pm027672 N 0.722
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.722
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.722
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.722
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.722
PK22765.1 Cannabis sativa PK22765.1 N 0.719
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.712
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.708
SELMODRAFT_4832 Selaginella moellendorffii SELMODRAFT_4832 N 0.708
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.708
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.708
SELMODRAFT_4756 Selaginella moellendorffii SELMODRAFT_4756 N 0.708
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.708
POPTR_0014s05840 Populus trichocarpa POPTR_0014s05840 N 0.708
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.708
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.708
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.708
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.708
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.708
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.708
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.708
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.708
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.708
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.708
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.708
Gorai.003G169800 Gossypium raimondii Gorai.003G169800 N 0.708
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.708
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.708
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.708
Ca_06740 Cicer arietinum Ca_06740 N 0.708
Cla019628 Citrullus lanatus Cla019628 N 0.708
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.708
Pm010795 Prunus mume Pm010795 N 0.708
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.708