CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_29.132
(
Carica papaya
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
evm.TU.supercontig_29.132
T316031_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_29.132
PLATZ
59
130
RRYVYHDVVRLGDAQKLIDCSFVQPYTTNNAKVVFLTERSMSRPFRGSGNFCIKCNRSLQHPFLFCSLSCKV
Links
Other
PLATZ
family TFs
Other
Carica papaya
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_016018
Theobroma cacao
TCM_016018
N
0.847
Eucgr.E00457
Eucalyptus grandis
Eucgr.E00457
N
0.833
Gorai.008G237000
Gossypium raimondii
Gorai.008G237000
N
0.819
Gorai.003G169800
Gossypium raimondii
Gorai.003G169800
N
0.806
VIT_02s0154g00150
Vitis vinifera
VIT_02s0154g00150
N
0.778
VIT_00s0233g00100
Vitis vinifera
VIT_00s0233g00100
N
0.764
cassava17724.valid.m1
Manihot esculenta
cassava17724.valid.m1
N
0.764
orange1.1g035685m.g
Citrus sinensis
orange1.1g035685m.g
N
0.764
GSMUA_Achr11G04210_001
Musa acuminata
GSMUA_Achr11G04210_001
N
0.750
PDK_20s1530701g001
Phoenix dactylifera
PDK_20s1530701g001
N
0.750
GLYMA01G17580
Glycine max
GLYMA01G17580
N
0.736
GRMZM2G017882
Zea mays
GRMZM2G017882
N
0.736
GSMUA_Achr7G03600_001
Musa acuminata
GSMUA_Achr7G03600_001
N
0.736
GSMUA_Achr8G33510_001
Musa acuminata
GSMUA_Achr8G33510_001
N
0.736
Sb04g004830
Sorghum bicolor
Sb04g004830
N
0.736
Si018139m.g
Setaria italica
Si018139m.g
N
0.736
Solyc01g091000.2
Solanum lycopersicum
Solyc01g091000.2
N
0.736
Traes_6BS_4DA724E79
Triticum aestivum
Traes_6BS_4DA724E79
N
0.736
TRIUR3_33737
Triticum urartu
TRIUR3_33737
N
0.736
30174.m008836
Ricinus communis
30174.m008836
N
0.736
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
0.736
Ciclev10021750m.g
Citrus clementina
Ciclev10021750m.g
N
0.736
Pavir.Aa03378
Panicum virgatum
Pavir.Aa03378
N
0.736
Pavir.Ab00578
Panicum virgatum
Pavir.Ab00578
N
0.736
AMTR_s00059p00116150
Amborella trichopoda
AMTR_s00059p00116150
N
0.722
BGIOSGA007635
Oryza indica
BGIOSGA007635
N
0.722
BGIOSGA023427
Oryza indica
BGIOSGA023427
N
0.722
BRADI1G32050
Brachypodium distachyon
BRADI1G32050
N
0.722
BRADI3G05380
Brachypodium distachyon
BRADI3G05380
N
0.722
GLYMA11G17770
Glycine max
GLYMA11G17770
N
0.722
GSMUA_Achr9G30790_001
Musa acuminata
GSMUA_Achr9G30790_001
N
0.722
GSMUA_AchrUn_randomG23740_001
Musa acuminata
GSMUA_AchrUn_randomG23740_001
N
0.722
LPERR06G19930
Leersia perrieri
LPERR06G19930
N
0.722
MLOC_21744
Hordeum vulgare
MLOC_21744
N
0.722
OB02G14750
Oryza brachyantha
OB02G14750
N
0.722
OBART02G05520
Oryza barthii
OBART02G05520
N
0.722
OBART06G24000
Oryza barthii
OBART06G24000
N
0.722
OGLUM02G05380
Oryza glumaepatula
OGLUM02G05380
N
0.722
OLONG_011712
Oryza longistaminata
OLONG_011712
N
0.722
OMERI06G23930
Oryza meridionalis
OMERI06G23930
N
0.722
ONIVA02G05860
Oryza nivara
ONIVA02G05860
N
0.722
ONIVA03G43780
Oryza nivara
ONIVA03G43780
N
0.722
OPUNC02G04680
Oryza punctata
OPUNC02G04680
N
0.722
OPUNC06G21750
Oryza punctata
OPUNC06G21750
N
0.722
ORGLA06G0201700
Oryza glaberrima
ORGLA06G0201700
N
0.722
ORUFI02G05620
Oryza rufipogon
ORUFI02G05620
N
0.722
OS02G0172800
Oryza sativa
OS02G0172800
N
0.722
OS06G0666100
Oryza sativa
OS06G0666100
N
0.722
Sb10g026620
Sorghum bicolor
Sb10g026620
N
0.722
Traes_7AL_5E9E6A334
Triticum aestivum
Traes_7AL_5E9E6A334
N
0.722
Pavir.Db00476
Panicum virgatum
Pavir.Db00476
N
0.722
PK22765.1
Cannabis sativa
PK22765.1
N
0.719
OGLUM06G25260
Oryza glumaepatula
OGLUM06G25260
N
0.718
POPTR_0001s15920
Populus trichocarpa
POPTR_0001s15920
N
0.708
TCM_005554
Theobroma cacao
TCM_005554
N
0.708
Traes_6DS_CA4C01DEF
Triticum aestivum
Traes_6DS_CA4C01DEF
N
0.708
Traes_7DL_B446D4CC6
Triticum aestivum
Traes_7DL_B446D4CC6
N
0.708
Cla006768
Citrullus lanatus
Cla006768
N
0.708
Cucsa.120560
Cucumis sativus
Cucsa.120560
N
0.708
Cucsa.132770
Cucumis sativus
Cucsa.132770
N
0.708
Aquca_013_00703
Aquilegia coerulea
Aquca_013_00703
N
0.708
Gorai.007G089600
Gossypium raimondii
Gorai.007G089600
N
0.708