CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00033p00166000
(
Amborella trichopoda
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04640 (PLATZ)
IPR006734
AMTR_s00033p00166000
T315199_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN14272
PLATZ
49
120
RRYVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNVCTNCDRTLQEPYIHCSLGCKV
Links
Other
PLATZ
family TFs
Other
Amborella trichopoda
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_11s0118g00600
Vitis vinifera
VIT_11s0118g00600
N
0.958
Pm027672
Prunus mume
Pm027672
N
0.944
MDP0000639526
Malus domestica
MDP0000639526
N
0.944
AT2G12646
Arabidopsis thaliana
AT2G12646
N
0.931
fgenesh2_kg.3__2996__AT2G12646.1
Arabidopsis lyrata
fgenesh2_kg.3__2996__AT2G12646.1
N
0.931
GLYMA13G23360
Glycine max
GLYMA13G23360
N
0.931
GLYMA17G11470
Glycine max
GLYMA17G11470
N
0.931
GSMUA_Achr1G09990_001
Musa acuminata
GSMUA_Achr1G09990_001
N
0.931
PRUPE_ppa019806mg
Prunus persica
PRUPE_ppa019806mg
N
0.931
scaffold_303520.1
Arabidopsis lyrata
scaffold_303520.1
N
0.931
Solyc07g007320.1
Solanum lycopersicum
Solyc07g007320.1
N
0.931
Ca_06740
Cicer arietinum
Ca_06740
N
0.931
30090.m000247
Ricinus communis
30090.m000247
N
0.931
cassava446.valid.m1
Manihot esculenta
cassava446.valid.m1
N
0.931
Bostr.22685s0001
Boechera stricta
Bostr.22685s0001
N
0.931
Cagra.2506s0001
Capsella grandiflora
Cagra.2506s0001
N
0.931
Carubv10015124m.g
Capsella rubella
Carubv10015124m.g
N
0.931
POPTR_0018s12380
Populus trichocarpa
POPTR_0018s12380
N
0.917
TCM_038233
Theobroma cacao
TCM_038233
N
0.917
Cucsa.132770
Cucumis sativus
Cucsa.132770
N
0.917
Aquca_016_00081
Aquilegia coerulea
Aquca_016_00081
N
0.917
Eucgr.C00450
Eucalyptus grandis
Eucgr.C00450
N
0.917
Gorai.009G013500
Gossypium raimondii
Gorai.009G013500
N
0.917
SapurV1A.0306s0210
Salix purpurea
SapurV1A.0306s0210
N
0.917
SapurV1A.2696s0020
Salix purpurea
SapurV1A.2696s0020
N
0.917
Thhalv10022828m.g
Eutrema salsugineum
Thhalv10022828m.g
N
0.917
Bo3g087070
Brassica oleracea
Bo3g087070
N
0.903
Bra013149
Brassica rapa
Bra013149
N
0.903
MTR_4g116300
Medicago truncatula
MTR_4g116300
N
0.903
POPTR_0006s05950
Populus trichocarpa
POPTR_0006s05950
N
0.903
evm.TU.supercontig_46.74
Carica papaya
evm.TU.supercontig_46.74
N
0.903
Gorai.010G057300
Gossypium raimondii
Gorai.010G057300
N
0.903
Bo9g022400
Brassica oleracea
Bo9g022400
N
0.889
Bra037203
Brassica rapa
Bra037203
N
0.889
GLYMA09G12330
Glycine max
GLYMA09G12330
N
0.889
GLYMA15G23920
Glycine max
GLYMA15G23920
N
0.889
cassava41034.m1
Manihot esculenta
cassava41034.m1
N
0.889
gene30812-v1.0-hybrid
Fragaria vesca
gene30812-v1.0-hybrid
N
0.889
BGIOSGA007009
Oryza indica
BGIOSGA007009
N
0.875
GRMZM2G070295
Zea mays
GRMZM2G070295
N
0.875
GSMUA_Achr9G22490_001
Musa acuminata
GSMUA_Achr9G22490_001
N
0.875
LPERR02G05550
Leersia perrieri
LPERR02G05550
N
0.875
OB02G15630
Oryza brachyantha
OB02G15630
N
0.875
OPUNC02G05490
Oryza punctata
OPUNC02G05490
N
0.875
ORGLA02G0058300
Oryza glaberrima
ORGLA02G0058300
N
0.875
OS02G0183000
Oryza sativa
OS02G0183000
N
0.875
Si019544m.g
Setaria italica
Si019544m.g
N
0.875
Ciclev10010747m.g
Citrus clementina
Ciclev10010747m.g
N
0.875
Gorai.004G110400
Gossypium raimondii
Gorai.004G110400
N
0.875
orange1.1g042361m.g
Citrus sinensis
orange1.1g042361m.g
N
0.875
Pavir.Ab00641
Panicum virgatum
Pavir.Ab00641
N
0.875
chr6.CM0037.1230.nd
Lotus japonicus
chr6.CM0037.1230.nd
N
0.875
PDK_20s1397531g003
Phoenix dactylifera
PDK_20s1397531g003
N
0.875
BRADI3G06190
Brachypodium distachyon
BRADI3G06190
N
0.861
GSMUA_Achr6G35220_001
Musa acuminata
GSMUA_Achr6G35220_001
N
0.861
MLOC_37403
Hordeum vulgare
MLOC_37403
N
0.861
Sb04g005680
Sorghum bicolor
Sb04g005680
N
0.861
Traes_6AS_3CC6C63F9
Triticum aestivum
Traes_6AS_3CC6C63F9
N
0.861
Traes_6BS_A7DE5BFD1
Triticum aestivum
Traes_6BS_A7DE5BFD1
N
0.861
Traes_6DS_9C50DA0DE
Triticum aestivum
Traes_6DS_9C50DA0DE
N
0.861
TRIUR3_16881
Triticum urartu
TRIUR3_16881
N
0.861
Lus10008814.g
Linum usitatissimum
Lus10008814.g
N
0.861
Pavir.J35161
Panicum virgatum
Pavir.J35161
N
0.861
mgf020898m
Mimulus guttatus
mgf020898m
N
0.847
Lus10008031.g
Linum usitatissimum
Lus10008031.g
N
0.847
Lus10039989.g
Linum usitatissimum
Lus10039989.g
N
0.847
PDK_20s1316692g001
Phoenix dactylifera
PDK_20s1316692g001
N
0.833
GSMUA_Achr6G30690_001
Musa acuminata
GSMUA_Achr6G30690_001
N
0.819
Lus10038103.g
Linum usitatissimum
Lus10038103.g
N
0.806
Pavir.Aa03378
Panicum virgatum
Pavir.Aa03378
N
0.806
Si018139m.g
Setaria italica
Si018139m.g
N
0.792
Pavir.Ab00578
Panicum virgatum
Pavir.Ab00578
N
0.792
PGSC0003DMG400007885
Solanum tuberosum
PGSC0003DMG400007885
N
0.789
Solyc12g010470.1
Solanum lycopersicum
Solyc12g010470.1
N
0.789
GRMZM2G017882
Zea mays
GRMZM2G017882
N
0.778
GSMUA_Achr7G03600_001
Musa acuminata
GSMUA_Achr7G03600_001
N
0.778
GSMUA_Achr8G33510_001
Musa acuminata
GSMUA_Achr8G33510_001
N
0.778
Sb04g004830
Sorghum bicolor
Sb04g004830
N
0.778
PDK_20s1530701g001
Phoenix dactylifera
PDK_20s1530701g001
N
0.778
BGIOSGA007635
Oryza indica
BGIOSGA007635
N
0.764
GSMUA_AchrUn_randomG23740_001
Musa acuminata
GSMUA_AchrUn_randomG23740_001
N
0.764
OB02G14750
Oryza brachyantha
OB02G14750
N
0.764
OBART02G05520
Oryza barthii
OBART02G05520
N
0.764
OGLUM02G05380
Oryza glumaepatula
OGLUM02G05380
N
0.764
ONIVA02G05860
Oryza nivara
ONIVA02G05860
N
0.764
OPUNC02G04680
Oryza punctata
OPUNC02G04680
N
0.764
ORUFI02G05620
Oryza rufipogon
ORUFI02G05620
N
0.764
OS02G0172800
Oryza sativa
OS02G0172800
N
0.764
Sb10g026620
Sorghum bicolor
Sb10g026620
N
0.764
Traes_6BS_4DA724E79
Triticum aestivum
Traes_6BS_4DA724E79
N
0.764
Traes_7AL_5E9E6A334
Triticum aestivum
Traes_7AL_5E9E6A334
N
0.764
TRIUR3_33737
Triticum urartu
TRIUR3_33737
N
0.764
BRADI1G32050
Brachypodium distachyon
BRADI1G32050
N
0.750
BRADI3G05380
Brachypodium distachyon
BRADI3G05380
N
0.750
GSMUA_Achr9G30790_001
Musa acuminata
GSMUA_Achr9G30790_001
N
0.750
LPERR02G04770
Leersia perrieri
LPERR02G04770
N
0.750
MLOC_21744
Hordeum vulgare
MLOC_21744
N
0.750
Traes_6DS_CA4C01DEF
Triticum aestivum
Traes_6DS_CA4C01DEF
N
0.750
Traes_7DL_B446D4CC6
Triticum aestivum
Traes_7DL_B446D4CC6
N
0.750
Pavir.Db00476
Panicum virgatum
Pavir.Db00476
N
0.750
AMTR_s00059p00116150
Amborella trichopoda
AMTR_s00059p00116150
N
0.736
BGIOSGA023427
Oryza indica
BGIOSGA023427
N
0.736
Bo7g041160
Brassica oleracea
Bo7g041160
N
0.736
Bra014899
Brassica rapa
Bra014899
N
0.736
fgenesh1_pm.C_scaffold_1002523
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002523
N
0.736
LPERR06G19930
Leersia perrieri
LPERR06G19930
N
0.736
OBART06G24000
Oryza barthii
OBART06G24000
N
0.736
OLONG_011712
Oryza longistaminata
OLONG_011712
N
0.736
OMERI06G23930
Oryza meridionalis
OMERI06G23930
N
0.736
ONIVA03G43780
Oryza nivara
ONIVA03G43780
N
0.736
OPUNC06G21750
Oryza punctata
OPUNC06G21750
N
0.736
ORGLA06G0201700
Oryza glaberrima
ORGLA06G0201700
N
0.736
OS06G0666100
Oryza sativa
OS06G0666100
N
0.736
29417.m000034
Ricinus communis
29417.m000034
N
0.736
cassava11490.m1
Manihot esculenta
cassava11490.m1
N
0.736
Bostr.15697s0409
Boechera stricta
Bostr.15697s0409
N
0.736
Cagra.1508s0089
Capsella grandiflora
Cagra.1508s0089
N
0.736
Carubv10011663m.g
Capsella rubella
Carubv10011663m.g
N
0.736
Pavir.Da00255
Panicum virgatum
Pavir.Da00255
N
0.736
AMTR_s00032p00241350
Amborella trichopoda
AMTR_s00032p00241350
N
0.722
Bo2g121040
Brassica oleracea
Bo2g121040
N
0.722
Bra038403
Brassica rapa
Bra038403
N
0.722
GLYMA09G05781
Glycine max
GLYMA09G05781
N
0.722
GSMUA_Achr2G02580_001
Musa acuminata
GSMUA_Achr2G02580_001
N
0.722
OGLUM06G25260
Oryza glumaepatula
OGLUM06G25260
N
0.722
Thhalv10009789m.g
Eutrema salsugineum
Thhalv10009789m.g
N
0.722
AT1G31040
Arabidopsis thaliana
AT1G31040
N
0.708
GLYMA15G17040
Glycine max
GLYMA15G17040
N
0.708
GSMUA_Achr11G04210_001
Musa acuminata
GSMUA_Achr11G04210_001
N
0.708
GSMUA_Achr6G20140_001
Musa acuminata
GSMUA_Achr6G20140_001
N
0.708
POPTR_0003s07310
Populus trichocarpa
POPTR_0003s07310
N
0.708
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N
0.708
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
0.708
SapurV1A.0210s0200
Salix purpurea
SapurV1A.0210s0200
N
0.708
LjSGA_033751.1
Lotus japonicus
LjSGA_033751.1
N
0.708