Cagra.2506s0001 (Capsella grandiflora)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Cagra.2506s0001 T315974_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2506s0001.1.p PLATZ 60 131

Links

Other PLATZ family TFs
Other Capsella grandiflora TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G12646 Arabidopsis thaliana AT2G12646 N 1.000
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 1.000
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 1.000
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 1.000
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 1.000
TCM_038233 Theobroma cacao TCM_038233 N 0.986
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.986
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.986
MDP0000639526 Malus domestica MDP0000639526 N 0.986
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.986
Bo3g087070 Brassica oleracea Bo3g087070 N 0.972
Bra013149 Brassica rapa Bra013149 N 0.972
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.972
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.972
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.972
Ca_06740 Cicer arietinum Ca_06740 N 0.972
Pm027672 Prunus mume Pm027672 N 0.972
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.972
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.972
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.972
Bo9g022400 Brassica oleracea Bo9g022400 N 0.958
Bra037203 Brassica rapa Bra037203 N 0.958
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.958
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.958
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.958
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.944
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.944
30090.m000247 Ricinus communis 30090.m000247 N 0.944
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.944
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.944
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.944
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.944
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.944
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.944
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.931
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.931
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.931
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.931
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.931
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.903
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.903
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.875
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.875
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.875
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.875
OB02G15630 Oryza brachyantha OB02G15630 N 0.875
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.875
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.875
OS02G0183000 Oryza sativa OS02G0183000 N 0.875
Si019544m.g Setaria italica Si019544m.g N 0.875
mgf020898m Mimulus guttatus mgf020898m N 0.875
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.875
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.875
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.875
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.861
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.861
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.861
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.861
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.861
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.861
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.861
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.861
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.861
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.861
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.847
Lus10039989.g Linum usitatissimum Lus10039989.g N 0.833
Lus10038103.g Linum usitatissimum Lus10038103.g N 0.819
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.819
PGSC0003DMG400007885 Solanum tuberosum PGSC0003DMG400007885 N 0.817
Solyc12g010470.1 Solanum lycopersicum Solyc12g010470.1 N 0.817
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.806
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.764
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.750
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.750
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.750
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.750
Si018139m.g Setaria italica Si018139m.g N 0.750
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.750
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.750
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.736
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.722
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.722
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.722
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.722
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.722
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.722
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.722
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.722
OB02G14750 Oryza brachyantha OB02G14750 N 0.722
OBART02G05520 Oryza barthii OBART02G05520 N 0.722
OBART06G24000 Oryza barthii OBART06G24000 N 0.722
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.722
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.722
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.722
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.722
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.722
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.722
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.722
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.722
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.722
OS02G0172800 Oryza sativa OS02G0172800 N 0.722
OS06G0666100 Oryza sativa OS06G0666100 N 0.722
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.722
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.722
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.722
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.722
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.722
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.708
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.708
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.708
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.708
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.708
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.708