CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g6531
(
Steinernema glaseri
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
L893_g6531
T199708_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g6531.t1
Grainyhead
185
402
PQELVERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTSIRRDDDRMTYVNKGQYYSVVLSYIPDHQKPLQSKTVRSCLMLAFREDKTYEKEMETWCKWHKEQQNRRQRIIDFDPKNSSGIIGTVSEPALNAIDFYWEPTEGPVKISVAVQCLSTDFSPQKGVKGWPMHLQIDTFDDENAKVPFHRGYCQIKVFCDKGANRKMLHENRRDEKRRQT
L893_g6531.t2
Grainyhead
185
402
PQELVERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTSIRRDDDRMTYVNKGQYYSVVLSYIPDHQKPLQSKTVRSCLMLAFREDKTYEKEMETWCKWHKEQQNRRQRIIDFDPKNSSGIIGTVSEPALNAIDFYWEPTEGPVKISVAVQCLSTDFSPQKGVKGWPMHLQIDTFDDENAKVPFHRGYCQIKVFCDKGAERKLRDEDKRAQKRRNQ
Links
Other
Grainyhead
family TFs
Other
Steinernema glaseri
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK27149.1
Cannabis sativa
PK27149.1
D
POPTR_0002s11660
Populus trichocarpa
POPTR_0002s11660
I
POPTR_0014s01390
Populus trichocarpa
POPTR_0014s01390
I
Cla010123
Citrullus lanatus
Cla010123
I
30170.m013679
Ricinus communis
30170.m013679
I
cassava8864.m1
Manihot esculenta
cassava8864.m1
I
Cucsa.353000
Cucumis sativus
Cucsa.353000
I
Cucsa.395470
Cucumis sativus
Cucsa.395470
I
gene02614-v1.0-hybrid
Fragaria vesca
gene02614-v1.0-hybrid
I
MDP0000140166
Malus domestica
MDP0000140166
I
MDP0000200822
Malus domestica
MDP0000200822
I
Bo7g098020
Brassica oleracea
Bo7g098020
N
Bra013005
Brassica rapa
Bra013005
N