CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL23
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT5G41920
T199842_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G41920.1
GRAS
40
400
LLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRRKRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_09281
Exophiala aquamarina
A1O9_09281
N
ANIA_07971
Aspergillus nidulans
CADANIAG00003989
N
NechaG94954
Fusarium solani
NechaG94954
N
PV09_03616
Verruconis gallopava
PV09_03616
N
Z517_07456
Fonsecaea pedrosoi
Z517_07456
N
Z518_09634
Rhinocladiella mackenziei
Z518_09634
N
fgenesh1_pm.sca_9_chr7_10_0000054
Nectria haematococca
fgenesh1_pm.sca_9_chr7_10_0000054
N