CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400006132
(
Solanum tuberosum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PGSC0003DMG400006132
T201111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400015695
GRAS
165
535
LKQVLIACAKAVSDGELVTAQVLISELRQMVSVSGEPIQRLGAYILEGLVARLGASGSSICKSLRCKEPASFELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENRVHIIDFQIAQGSQWVPMIQAFAARPGGPPHIRITGIDDSTSAYARGGGLDIVGQRLSKLAKTFKVPFEFHPAAMSGSDVQLKNLGIQPGEALAVNFAFTLHHMPDESVSTENHRDRLLRMVKNLNPKVVTLVEQESNTNTAAFFPRFLETLDYYSAMFESIDMTLSRGHKERINVEQHCLARDVVNIIACEGIERVERHELLGKWKSRFRMAGFNPYPLSSLVNATIKTLLESYSDKYRLEERDGALYLGWMNRDLVASCAWK
PGSC0003DMT400015696
GRAS
165
535
LKQVLIACAKAVSDGELVTAQVLISELRQMVSVSGEPIQRLGAYILEGLVARLGASGSSICKSLRCKEPASFELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENRVHIIDFQIAQGSQWVPMIQAFAARPGGPPHIRITGIDDSTSAYARGGGLDIVGQRLSKLAKTFKVPFEFHPAAMSGSDVQLKNLGIQPGEALAVNFAFTLHHMPDESVSTENHRDRLLRMVKNLNPKVVTLVEQESNTNTAAFFPRFLETLDYYSAMFESIDMTLSRGHKERINVEQHCLARDVVNIIACEGIERVERHELLGKWKSRFRMAGFNPYPLSSLVNATIKTLLESYSDKYRLEERDGALYLGWMNRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Solanum tuberosum
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI04G19030
Oryza meridionalis
OMERI04G19030
N
Pavir.Gb01009
Panicum virgatum
Pavir.Gb01009
N
Pavir.Ga00626
Panicum virgatum
Pavir.Ga00626
N
Si009601m.g
Setaria italica
Si009601m.g
N
OS04G0580300
Oryza sativa
OS04G0580300
N
ORUFI04G24440
Oryza rufipogon
ORUFI04G24440
N
ORGLA04G0197700
Oryza glaberrima
ORGLA04G0197700
N
OPUNC04G20350
Oryza punctata
OPUNC04G20350
N
ONIVA04G21910
Oryza nivara
ONIVA04G21910
N
BGIOSGA014504
Oryza indica
BGIOSGA014504
N
OMERI02G27200
Oryza meridionalis
OMERI02G27200
N
OGLUM04G22640
Oryza glumaepatula
OGLUM04G22640
N
OB04G29620
Oryza brachyantha
OB04G29620
N
MLOC_72117
Hordeum vulgare
MLOC_72117
N
LPERR04G18520
Leersia perrieri
LPERR04G18520
N
GRMZM2G173429
Zea mays
GRMZM2G173429
N
GRMZM2G109869
Zea mays
GRMZM2G109869
N
BRADI5G19190
Brachypodium distachyon
BRADI5G19190
N