CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_10004
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_10004
T201877_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_10004
GRAS
168
548
AEQLLNPCAAAIAGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTSSGAITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNNSRTIHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSSAENDQNMETPFSIGPCGDNFSTRLLGYAQSINVNLQINKLDNHPLQTLNAKIVDTSPDETFIVCAQFRLHHLNHHTPDERSEFLKVLRDMEPKGVILSENNLECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKGRENDERRMMEGEAAKALTNQREMNEGREKWCERMKEAGFAGEIFGEDAIDGGRALLRKYDSNWEMKVEEKNTSVGIWWKGQPVSFCSLWK
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.740
chr5.CM0569.130.nd
Lotus japonicus
chr5.CM0569.130.nd
N
0.825
PK20670.1
Cannabis sativa
PK20670.1
N
0.734
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.751
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.723
MDP0000308434
Malus domestica
MDP0000308434
N
0.731
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.745
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.759
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.709
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.734
GLYMA07G04430
Glycine max
GLYMA07G04430
N
0.820
Pm013263
Prunus mume
Pm013263
N
0.759
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.742
TCM_029136
Theobroma cacao
TCM_029136
N
0.752
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.762
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.742
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.770
MTR_8g020840
Medicago truncatula
MTR_8g020840
N
0.898
GLYMA16G01020
Glycine max
GLYMA16G01020
N
0.831