CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava19449.valid.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava19449.valid.m1
T202059_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava19449.valid.m1
GRAS
405
736
LRSLLILCAQAASANDFRTANELLKQVREHSSPLGDGSQRLAHYFANGLEARLAGSGTGMQDFYTSIASRRMTAADMLKAYKTQLHACPFKKLSILFANKMILHAAENATTLHIVDFGVLYGFQWPILIQLLSMRPGGPPKLRITGIELPQQGFRPAERIEETGRRLAKYCQRFNVPFDYNPIAAQEWEKIPIEDLKIDSNEVLAVNCLCRFKNLLDETVEVNCPRNAVLNLIRKIKPNIFVHAIINGSYNAPFFVTRFREALFHFSSLFDMFDSTIPREDQERLKFEREFCGREAMNVVACEGMERVERPETYKQWQFRTTRAGCNRKLQV
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0001570201
Nippostrongylus brasiliensis
NBR_0001570201
N
0.000
GPUH_0001628601
Gongylonema pulchrum
GPUH_0001628601
N
0.000
HCOI00011100
Haemonchus contortus
HCOI00011100
N
0.000
HCOI00340600
Haemonchus contortus
HCOI00340600
N
0.000
HPBE_0002631501
Heligmosomoides bakeri
HPBE_0002631501
N
0.000
HPLM_0001619301
Haemonchus placei
HPLM_0001619301
N
0.000
L596_g11433
Steinernema carpocapsae
L596_g11433
N
0.000
L889_g26115
Steinernema feltiae
L889_g26115
N
0.000
L892_g24984
Steinernema scapterisci
L892_g24984
N
0.000
L893_g12913
Steinernema glaseri
L893_g12913
N
0.000
L893_g29578
Steinernema glaseri
L893_g29578
N
0.000
DICVIV_00632
Dictyocaulus viviparus
DICVIV_00632
N
0.000
nDi.2.2.2.g07634
Dirofilaria immitis
nDi.2.2.2.g07634
N
0.000
NECAME_08819
Necator americanus
NECAME_08819
N
0.000
nLs.2.1.2.g07567
Litomosoides sigmodontis
nLs.2.1.2.g07567
N
0.000
nOo.2.0.1.g05364
Onchocerca ochengi
nOo.2.0.1.g05364
N
0.000
OFLC_0001050101
Onchocerca flexuosa
OFLC_0001050101
N
0.000
SVUK_0000788101
Strongylus vulgaris
SVUK_0000788101
N
0.000
TCNE_0001553601
Toxocara canis
TCNE_0001553601
N
0.000
TCNE_0001553701
Toxocara canis
TCNE_0001553701
N
0.000
TCNE_0001553801
Toxocara canis
TCNE_0001553801
N
0.000
TELCIR_12880
Teladorsagia circumcincta
TELCIR_12880
N
0.000
LOAG_08235
Loa loa
LOAG_08235
N
0.000
CBG02238
Caenorhabditis briggsae
CBG02238
N
0.000
CBG11894
Caenorhabditis briggsae
CBG11894
N
0.000
CBG18298
Caenorhabditis briggsae
CBG18298
N
0.000
CBN10862
Caenorhabditis brenneri
CBN10862
N
0.000
CBN17666
Caenorhabditis brenneri
CBN17666
N
0.000
CBN20898
Caenorhabditis brenneri
CBN20898
N
0.000
CBN22260
Caenorhabditis brenneri
CBN22260
N
0.000
CJA04706
Caenorhabditis japonica
CJA04706
N
0.000
CRE03641
Caenorhabditis remanei
CRE03641
N
0.000
CRE03839
Caenorhabditis remanei
CRE03839
N
0.000
WUBG_17286
Wuchereria bancrofti
WUBG_17286
N
0.000
PPA14638
Pristionchus pacificus
PPA14638
N
0.000
cey-3
Caenorhabditis elegans
WBGene00000474
N
0.000
cey-4
Caenorhabditis elegans
WBGene00000475
N
0.000
WBGene00246599
Onchocerca volvulus
WBGene00246599
N
0.000
ACAC_0001011001
Angiostrongylus cantonensis
ACAC_0001011001
N
0.000
ACOC_0000620901
Angiostrongylus costaricensis
ACOC_0000620901
N
0.000
ANCCAN_02239
Ancylostoma caninum
ANCCAN_02239
N
0.000
ANCDUO_12773
Ancylostoma duodenale
ANCDUO_12773
N
0.000
ASU_02611
Ascaris suum
ASU_02611
N
0.000
CGOC_0000831401
Cylicostephanus goldi
CGOC_0000831401
N
0.000