CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_014_00674
(
Aquilegia coerulea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Aquca_014_00674
T202250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_014_00674.1
GRAS
48
468
LIHLLISCANQVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEALADRVLKAWSGLYKALNSTKISSVAEGILVRRSFFDLCPFLKLAIVITNQAIMEAMEGEKIVHIIDLSASEPAQWIALLQALKARPEGPPHLRITGIHEHKEVLEQTALCLTEEAEKLDIPFQFNPIVSKLEKLDIESLRVKTGEAVAVSSTLQLHSLLASDDEILRKKFSPPKNMNSAQLHRVFKMNQSTLGELMEKDMVNGYSPSHDSPSSSSPLLTSAKMESFLMSLWGLSPKIMVVAEQESNHNGSTLMERLLEALYYYASLFDCLESTLPRASMERIKVEKMLFGEEIKNIIACEGVERKERHEKLDRWIQRLELSGFGRVPLSYFGLLQARRLLQSYGCDGYKIKEENGCLVICWHDRALFSVSSWR
Aquca_014_00674.2
GRAS
48
468
LIHLLISCANQVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEALADRVLKAWSGLYKALNSTKISSVAEGILVRRSFFDLCPFLKLAIVITNQAIMEAMEGEKIVHIIDLSASEPAQWIALLQALKARPEGPPHLRITGIHEHKEVLEQTALCLTEEAEKLDIPFQFNPIVSKLEKLDIESLRVKTGEAVAVSSTLQLHSLLASDDEILRKKFSPPKNMNSAQLHRVFKMNQSTLGELMEKDMVNGYSPSHDSPSSSSPLLTSAKMESFLMSLWGLSPKIMVVAEQESNHNGSTLMERLLEALYYYASLFDCLESTLPRASMERIKVEKMLFGEEIKNIIACEGVERKERHEKLDRWIQRLELSGFGRVPLSYFGLLQARRLLQSYGCDGYKIKEENGCLVICWHDRALFSVSSWR
Links
Other
GRAS
family TFs
Other
Aquilegia coerulea
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10000178m.g
Citrus clementina
Ciclev10000178m.g
N
0.000
Traes_4DL_E88B8B0F6
Triticum aestivum
Traes_4DL_E88B8B0F6
N
0.000
TRIUR3_21153
Triticum urartu
TRIUR3_21153
N
0.000
VIT_14s0060g02420
Vitis vinifera
VIT_14s0060g02420
N
0.000
Ca_03676
Cicer arietinum
Ca_03676
N
0.000
Pm003293
Prunus mume
Pm003293
N
0.000
30128.m008807
Ricinus communis
30128.m008807
N
0.000
cassava22130.valid.m1
Manihot esculenta
cassava22130.valid.m1
N
0.000
Cucsa.091190
Cucumis sativus
Cucsa.091190
N
0.000
mgf016253m
Mimulus guttatus
mgf016253m
N
0.000
Aquca_016_00289
Aquilegia coerulea
Aquca_016_00289
N
0.000
Bostr.25219s0040
Boechera stricta
Bostr.25219s0040
N
0.000
Cagra.4395s0091
Capsella grandiflora
Cagra.4395s0091
N
0.000
Carubv10011895m.g
Capsella rubella
Carubv10011895m.g
N
0.000
Traes_4BS_BDBC1B1FA
Triticum aestivum
Traes_4BS_BDBC1B1FA
N
0.000
Eucgr.B01932
Eucalyptus grandis
Eucgr.B01932
N
0.000
evm.TU.supercontig_48.77
Carica papaya
evm.TU.supercontig_48.77
N
0.000
gene22503-v1.0-hybrid
Fragaria vesca
gene22503-v1.0-hybrid
N
0.000
Gorai.004G240400
Gossypium raimondii
Gorai.004G240400
N
0.000
Lus10017092.g
Linum usitatissimum
Lus10017092.g
N
0.000
Lus10037812.g
Linum usitatissimum
Lus10037812.g
N
0.000
orange1.1g002177m.g
Citrus sinensis
orange1.1g002177m.g
N
0.000
Pavir.J33002
Panicum virgatum
Pavir.J33002
N
0.000
SapurV1A.0066s0380
Salix purpurea
SapurV1A.0066s0380
N
0.000
SapurV1A.0424s0260
Salix purpurea
SapurV1A.0424s0260
N
0.000
Thhalv10006723m.g
Eutrema salsugineum
Thhalv10006723m.g
N
0.000
PK22697.1
Cannabis sativa
PK22697.1
N
0.000
PDK_20s1361681g001
Phoenix dactylifera
PDK_20s1361681g001
N
0.000
OMERI03G15300
Oryza meridionalis
OMERI03G15300
N
0.000
AT1G09060
Arabidopsis thaliana
AT1G09060
N
0.000
Bo8g058150
Brassica oleracea
Bo8g058150
N
0.000
Bra030754
Brassica rapa
Bra030754
N
0.000
BRADI1G62640
Brachypodium distachyon
BRADI1G62640
N
0.000
F775_27911
Aegilops tauschii
F775_27911
N
0.000
fgenesh2_kg.1__941__AT1G09060.2
Arabidopsis lyrata
fgenesh2_kg.1__941__AT1G09060.2
N
0.000
GLYMA10G29371
Glycine max
GLYMA10G29371
N
0.000
GLYMA20G37910
Glycine max
GLYMA20G37910
N
0.000
GRMZM2G428933
Zea mays
GRMZM2G428933
N
0.000
LPERR03G14970
Leersia perrieri
LPERR03G14970
N
0.000
MLOC_15207
Hordeum vulgare
MLOC_15207
N
0.000
MTR_1g083120
Medicago truncatula
MTR_1g083120
N
0.000
OGLUM03G17600
Oryza glumaepatula
OGLUM03G17600
N
0.000
AMTR_s00057p00206860
Amborella trichopoda
AMTR_s00057p00206860
N
0.000
ONIVA03G18210
Oryza nivara
ONIVA03G18210
N
0.000
ORGLA03G0163900
Oryza glaberrima
ORGLA03G0163900
N
0.000
ORUFI03G17780
Oryza rufipogon
ORUFI03G17780
N
0.000
OS03G0346700
Oryza sativa
OS03G0346700
N
0.000
PGSC0003DMG400022424
Solanum tuberosum
PGSC0003DMG400022424
N
0.000
POPTR_0005s02710
Populus trichocarpa
POPTR_0005s02710
N
0.000
POPTR_0013s01970
Populus trichocarpa
POPTR_0013s01970
N
0.000
PRUPE_ppa020523mg
Prunus persica
PRUPE_ppa020523mg
N
0.000
Sb01g035540
Sorghum bicolor
Sb01g035540
N
0.000
Si034162m.g
Setaria italica
Si034162m.g
N
0.000
Solyc02g078790.2
Solanum lycopersicum
Solyc02g078790.2
N
0.000
TCM_026634
Theobroma cacao
TCM_026634
N
0.000
Traes_4AS_93108583B
Triticum aestivum
Traes_4AS_93108583B
N
0.000