CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0463s0002
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.0463s0002
T202311_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0463s0002.1.p
GRAS
152
504
LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDDVALSDTLQIHFYESCPYLKFAHFTANQAILEAFAMADKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTELQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRSGSESVAVNSVFDLHRLLAHPGSIDKFLSTIQSIRPDIMTIVEQEANHNGLVFLDRFTESLHYYSSLFDSLEGSPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGSRGFKPVNIGSNAYKQASMLLALHAGADGYSVDENEGCLLLGWQTRPLIATSAWS
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_01518
Aspergillus nidulans
CADANIAG00008146
D
AOL_s00078g224
Arthrobotrys oligospora
AOL_s00078g224
I
SBOR_8252
Sclerotinia borealis
SBOR_8252
I
PV04_09950
Capronia semiimmersa
PV04_09950
I
PITC_059030
Penicillium italicum
PITC_059030
I
U727_0043425051
Penicillium solitum
U727_0043425051
I
PCH_Pc20g11250
Penicillium rubens
PCH_Pc20g11250
I
HMPREF1120_07579
Exophiala dermatitidis
HMPREF1120_07579
I
H072_5207
Dactylellina haptotyla
H072_5207
I
e_gw1.00168.63.1
Aspergillus carbonarius
e_gw1.00168.63.1
I
EPUS_00960
Endocarpon pusillum
EPUS_00960
I
Pc20g11250
Penicillium chrysogenum
Pc20g11250
I
COCVIDRAFT_17560
Bipolaris victoriae
COCVIDRAFT_17560
I
COCSADRAFT_27300
Bipolaris sorokiniana
COCSADRAFT_27300
I
COCMIDRAFT_8447
Bipolaris oryzae
COCMIDRAFT_8447
I
COCCADRAFT_8876
Bipolaris zeicola
COCCADRAFT_8876
I
COCC4DRAFT_54743
Bipolaris maydis
COCC4DRAFT_54743
I
NFIA_098020
Neosartorya fischeri
CADNFIAG00009187
I
ACLA_058700
Aspergillus clavatus
CADACLAG00005706
I
Bcin15g02950
Botrytis cinerea
Bcin15g02950
I
AB03428.1
Alternaria brassicicola
AB03428.1
N
CIMG_04295
Coccidioides immitis
CIMG_04295
N
TSTA_058980
Talaromyces stipitatus
TSTA_058980
N
SETTUDRAFT_159896
Setosphaeria turcica
SETTUDRAFT_159896
N
SEPMUDRAFT_35926
Sphaerulina musiva
SEPMUDRAFT_35926
N
PMAA_009490
Penicillium marneffei
PMAA_009490
N
PVAR5_2835
Byssochlamys spectabilis
PVAR5_2835
N
PV11_01458
Exophiala sideris
PV11_01458
N
PV10_06301
Exophiala mesophila
PV10_06301
N
PV09_04934
Verruconis gallopava
PV09_04934
N
PV08_00759
Exophiala spinifera
PV08_00759
N
PTT_08641
Pyrenophora teres
PTT_08641
N
PTRG_07912
Pyrenophora triticirepentis
PTRG_07912
N
PMAA_009490
Talaromyces marneffei
PMAA_009490
N
PDE_06483
Penicillium oxalicum
PDE_06483
N
LEMA_P029230.1
Leptosphaeria maculans
LEMA_P029230.1
N
GGTG_07312
Gaeumannomyces graminis
GGTG_07312
N
CPC735_074200
Coccidioides posadasii
CPC735_074200
N
CADANGAG00013211
Aspergillus niger
CADANGAG00013211
N