Cagra.0463s0002 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.0463s0002 T202311_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0463s0002.1.p GRAS 152 504

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.989
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.934
RGL1 Arabidopsis thaliana AT1G66350 N 0.900
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.895
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.834
Bo2g052880 Brassica oleracea Bo2g052880 N 0.823
Bra039762 Brassica rapa Bra039762 N 0.816
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.737
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.724
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.724
MDP0000669451 Malus domestica MDP0000669451 I 0.723
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.717
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.717
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.715
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.714
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.714
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.714
Pm014329 Prunus mume Pm014329 I 0.712
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.709
TCM_019165 Theobroma cacao TCM_019165 N 0.708
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.707
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.706
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.700