CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.26959s0284
(
Boechera stricta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Bostr.26959s0284
T202289_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26959s0284.1.p
GRAS
153
505
LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDDVALSDTLQIHFYESCPYLKFAHFTTNQAILEAFATADKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGSSLTEIQEVGWKLGQLASTIGLNFEFKSIALSNLSDLKPEMLDIRPGSESVAVNSVFKLHRLLAHPGSIDKFLSMIKSIRPNIITVVEQEANHNGAFFLDRFTESLHYYSSLFDSLEGPPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFSLEGFKPVNIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Boechera stricta
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0463s0002
Capsella grandiflora
Cagra.0463s0002
N
0.934
Carubv10020171m.g
Capsella rubella
Carubv10020171m.g
N
0.932
RGL1
Arabidopsis lyrata
fgenesh2_kg.2__868__AT1G66350.1
N
0.909
RGL1
Arabidopsis thaliana
AT1G66350
N
0.903
Thhalv10018436m.g
Eutrema salsugineum
Thhalv10018436m.g
N
0.845
Bra039762
Brassica rapa
Bra039762
N
0.831
Bo2g052880
Brassica oleracea
Bo2g052880
N
0.828
Lus10009133.g
Linum usitatissimum
Lus10009133.g
N
0.743
MDP0000669451
Malus domestica
MDP0000669451
I
0.718
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.712
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.712
TCM_019165
Theobroma cacao
TCM_019165
N
0.711
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.711
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.709
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.709
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.706
Pm014329
Prunus mume
Pm014329
I
0.704
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.701
GRMZM2G144744
Zea mays
GRMZM2G144744
N
0.700
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.700
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.700