TCM_019165 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_019165 T201615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY03951 GRAS 236 581

Links

Other GRAS family TFs
Other Theobroma cacao TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm014329 Prunus mume Pm014329 I 0.886
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.874
MDP0000669451 Malus domestica MDP0000669451 I 0.874
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.868
28677.m000055 Ricinus communis 28677.m000055 N 0.866
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.854
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.842
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.836
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.836
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.835
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.820
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.820
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.819
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.816
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.813
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.813
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.813
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.810
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.809
Cla020062 Citrullus lanatus Cla020062 N 0.807
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.799
29692.m000540 Ricinus communis 29692.m000540 N 0.792
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.792
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.784
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.784
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.781
Ca_13295 Cicer arietinum Ca_13295 I 0.781
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.778
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.775
TCM_010965 Theobroma cacao TCM_010965 N 0.775
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.775
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.772
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.772
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.760
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.760
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.760
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.757
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.754
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.754
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.749
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.749
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.749
PK14700.1 Cannabis sativa PK14700.1 N 0.748
mgf008289m Mimulus guttatus mgf008289m N 0.746
Bo7g078550 Brassica oleracea Bo7g078550 N 0.743
Bra024875 Brassica rapa Bra024875 N 0.743
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.740
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.740
Ca_05046 Cicer arietinum Ca_05046 N 0.740
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.737
MDP0000237978 Malus domestica MDP0000237978 N 0.737
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.734
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.731
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.728
Cla003996 Citrullus lanatus Cla003996 N 0.728
Pm006304 Prunus mume Pm006304 N 0.728
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.728
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.725
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.725
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.725
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.723
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.719
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.719
GAI Arabidopsis thaliana AT1G14920 N 0.716
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.715
SLR1 Oryza indica BGIOSGA013420 N 0.713
OBART03G31370 Oryza barthii OBART03G31370 N 0.713
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.713
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.713
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.713
SLR1 Oryza sativa OS03G0707600 N 0.713
Si039400m.g Setaria italica Si039400m.g N 0.713
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.713
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.713
Bo2g052880 Brassica oleracea Bo2g052880 N 0.711
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.711
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.711
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.711
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.711
RGA Arabidopsis thaliana AT2G01570 N 0.710
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.710
OB03G38380 Oryza brachyantha OB03G38380 N 0.708
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.708
RGL1 Arabidopsis thaliana AT1G66350 N 0.705
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.702
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.702
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.702