Lus10017626.g (Linum usitatissimum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Lus10017626.g T202724_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10017626 GRAS 223 584

Links

Other GRAS family TFs
Other Linum usitatissimum TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.975
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.878
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.874
MDP0000669451 Malus domestica MDP0000669451 I 0.872
Pm014329 Prunus mume Pm014329 I 0.860
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.853
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.849
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.845
TCM_019165 Theobroma cacao TCM_019165 N 0.842
28677.m000055 Ricinus communis 28677.m000055 N 0.839
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.834
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.828
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.828
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.828
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.825
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.818
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.814
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.810
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.808
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.807
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.806
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.786
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.786
Cla020062 Citrullus lanatus Cla020062 N 0.785
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.784
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.774
PK14700.1 Cannabis sativa PK14700.1 N 0.773
TCM_010965 Theobroma cacao TCM_010965 N 0.773
29692.m000540 Ricinus communis 29692.m000540 N 0.770
Ca_13295 Cicer arietinum Ca_13295 I 0.769
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.768
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.768
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.765
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.765
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.760
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.758
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.756
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.754
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.753
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.751
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.748
mgf008289m Mimulus guttatus mgf008289m N 0.747
Cla003996 Citrullus lanatus Cla003996 N 0.745
Pm006304 Prunus mume Pm006304 N 0.745
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.742
F775_03572 Aegilops tauschii F775_03572 N 0.741
Ca_05046 Cicer arietinum Ca_05046 N 0.740
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.740
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.737
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.732
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.729
MDP0000237978 Malus domestica MDP0000237978 N 0.728
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.728
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.724
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.723
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.723
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.723
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.723
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.723
GAI Arabidopsis thaliana AT1G14920 N 0.720
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.719
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.718
RGA Arabidopsis thaliana AT2G01570 N 0.718
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.718
Bra024875 Brassica rapa Bra024875 N 0.715
Bo7g078550 Brassica oleracea Bo7g078550 N 0.715
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.715
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.714
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.714
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.712
SLR1 Oryza sativa OS03G0707600 N 0.712
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.711
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.710
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.710
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.710
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.710
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.708
Si039400m.g Setaria italica Si039400m.g N 0.708
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.708
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.707
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.707
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.707
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.706
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.705
OBART03G31370 Oryza barthii OBART03G31370 N 0.704
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.704
SLR1 Oryza indica BGIOSGA013420 N 0.704
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.704
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.704
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.704
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.704
OB03G38380 Oryza brachyantha OB03G38380 N 0.702