Lus10033583.g (Linum usitatissimum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Lus10033583.g T202762_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10033583 GRAS 226 587

Links

Other GRAS family TFs
Other Linum usitatissimum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.975
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.883
MDP0000669451 Malus domestica MDP0000669451 I 0.869
Pm014329 Prunus mume Pm014329 I 0.858
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.850
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.849
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.846
28677.m000055 Ricinus communis 28677.m000055 N 0.846
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.841
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.830
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.830
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.830
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.827
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.813
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.813
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.807
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.806
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.804
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.804
TCM_019165 Theobroma cacao TCM_019165 N 0.799
Cla020062 Citrullus lanatus Cla020062 N 0.785
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.783
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.783
Ca_13295 Cicer arietinum Ca_13295 I 0.774
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.772
TCM_010965 Theobroma cacao TCM_010965 N 0.768
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.768
PK14700.1 Cannabis sativa PK14700.1 N 0.768
29692.m000540 Ricinus communis 29692.m000540 N 0.765
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.763
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.760
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.760
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.760
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.757
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.757
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.751
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.749
mgf008289m Mimulus guttatus mgf008289m N 0.749
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.749
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.746
Cla003996 Citrullus lanatus Cla003996 N 0.740
Pm006304 Prunus mume Pm006304 N 0.740
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.740
Ca_05046 Cicer arietinum Ca_05046 N 0.737
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.737
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.735
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.735
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.726
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.723
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.723
MDP0000237978 Malus domestica MDP0000237978 N 0.723
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.721
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.721
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.721
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.718
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.718
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.716
GAI Arabidopsis thaliana AT1G14920 N 0.715
RGA Arabidopsis thaliana AT2G01570 N 0.715
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.715
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.715
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.715
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.715
Si039400m.g Setaria italica Si039400m.g N 0.715
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.715
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.715
Bo7g078550 Brassica oleracea Bo7g078550 N 0.712
Bra024875 Brassica rapa Bra024875 N 0.712
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.712
SLR1 Oryza indica BGIOSGA013420 N 0.710
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.710
OBART03G31370 Oryza barthii OBART03G31370 N 0.710
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.710
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.710
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.710
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.710
SLR1 Oryza sativa OS03G0707600 N 0.710
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.710
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.708
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.707
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.707
OB03G38380 Oryza brachyantha OB03G38380 N 0.707
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.707
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.707
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.704
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.704
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.701