Cucsa.280310 (Cucumis sativus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cucsa.280310 T202142_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.280310.1 GRAS 218 577

Links

Other GRAS family TFs
Other Cucumis sativus TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla003996 Citrullus lanatus Cla003996 N 0.978
PK14700.1 Cannabis sativa PK14700.1 N 0.885
29692.m000540 Ricinus communis 29692.m000540 N 0.874
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.871
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.868
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.866
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.863
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.858
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.857
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.854
TCM_010965 Theobroma cacao TCM_010965 N 0.852
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.852
Pm006304 Prunus mume Pm006304 N 0.846
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.843
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.841
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.840
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.838
RGA Arabidopsis thaliana AT2G01570 N 0.830
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.830
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.826
Bo7g078550 Brassica oleracea Bo7g078550 N 0.824
Bra024875 Brassica rapa Bra024875 N 0.824
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.824
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.824
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.821
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.818
MDP0000237978 Malus domestica MDP0000237978 N 0.818
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.818
GAI Arabidopsis thaliana AT1G14920 N 0.815
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.815
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.812
Ca_05046 Cicer arietinum Ca_05046 N 0.812
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.807
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.801
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.797
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.791
Pm014329 Prunus mume Pm014329 I 0.785
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.779
mgf008289m Mimulus guttatus mgf008289m N 0.778
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.777
MDP0000669451 Malus domestica MDP0000669451 I 0.777
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.772
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.772
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.770
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.770
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.767
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.765
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.765
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.764
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.759
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.759
28677.m000055 Ricinus communis 28677.m000055 N 0.759
TCM_019165 Theobroma cacao TCM_019165 N 0.757
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.756
Cla020062 Citrullus lanatus Cla020062 N 0.756
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.756
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.752
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.750
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.748
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.745
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.742
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.742
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.741
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.741
Bo9g070200 Brassica oleracea Bo9g070200 N 0.739
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.737
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.734
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.733
Ca_13295 Cicer arietinum Ca_13295 I 0.728
Bra017443 Brassica rapa Bra017443 N 0.714
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.708
mgf025772m Mimulus guttatus mgf025772m N 0.706
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.706
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.706
F775_03572 Aegilops tauschii F775_03572 N 0.704