Bra024875 (Brassica rapa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bra024875 T199992_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra024875.1-P GRAS 208 568

Links

Other GRAS family TFs
Other Brassica rapa TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g078550 Brassica oleracea Bo7g078550 N 0.992
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.958
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.953
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.947
RGA Arabidopsis thaliana AT2G01570 N 0.944
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.941
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.911
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.871
GAI Arabidopsis thaliana AT1G14920 N 0.869
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.869
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.866
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.866
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.866
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.863
29692.m000540 Ricinus communis 29692.m000540 N 0.858
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.858
TCM_010965 Theobroma cacao TCM_010965 N 0.849
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.847
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.844
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.844
Bo9g070200 Brassica oleracea Bo9g070200 N 0.843
Bra017443 Brassica rapa Bra017443 N 0.838
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.838
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.838
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.838
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.830
PK14700.1 Cannabis sativa PK14700.1 N 0.826
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.824
Cla003996 Citrullus lanatus Cla003996 N 0.824
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.824
Pm006304 Prunus mume Pm006304 N 0.807
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.804
Ca_05046 Cicer arietinum Ca_05046 N 0.799
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.799
MDP0000237978 Malus domestica MDP0000237978 N 0.793
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.790
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.788
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.786
mgf008289m Mimulus guttatus mgf008289m N 0.771
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.768
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.765
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.763
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.762
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.760
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.760
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.757
MDP0000669451 Malus domestica MDP0000669451 I 0.757
Pm014329 Prunus mume Pm014329 I 0.757
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.750
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.750
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.746
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.744
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.744
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.744
TCM_019165 Theobroma cacao TCM_019165 N 0.743
28677.m000055 Ricinus communis 28677.m000055 N 0.743
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.740
Cla020062 Citrullus lanatus Cla020062 N 0.740
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.740
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.739
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.737
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.735
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.732
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.731
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.731
Ca_13295 Cicer arietinum Ca_13295 I 0.729
mgf025772m Mimulus guttatus mgf025772m N 0.723
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.715
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.712