AMTR_s00010p00148880 (Amborella trichopoda)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AMTR_s00010p00148880 T199773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM94130 GRAS 191 552

Links

Other GRAS family TFs
Other Amborella trichopoda TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.799
MDP0000669451 Malus domestica MDP0000669451 I 0.799
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.799
29692.m000540 Ricinus communis 29692.m000540 N 0.796
PK14700.1 Cannabis sativa PK14700.1 N 0.796
Pm014329 Prunus mume Pm014329 I 0.793
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.792
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.792
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.790
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.790
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.788
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.785
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.785
TCM_010965 Theobroma cacao TCM_010965 N 0.785
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.785
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.785
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.785
AMTR_s00012p00140500 Amborella trichopoda AMTR_s00012p00140500 N 0.782
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.782
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.781
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.779
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.779
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.777
Pm006304 Prunus mume Pm006304 N 0.774
MDP0000237978 Malus domestica MDP0000237978 N 0.774
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.772
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.771
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.771
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.768
Cla003996 Citrullus lanatus Cla003996 N 0.768
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.765
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.765
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.765
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.765
mgf008289m Mimulus guttatus mgf008289m N 0.763
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.763
28677.m000055 Ricinus communis 28677.m000055 N 0.760
Ca_05046 Cicer arietinum Ca_05046 N 0.757
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.757
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.757
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.754
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.751
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.751
RGA Arabidopsis thaliana AT2G01570 N 0.749
Cla020062 Citrullus lanatus Cla020062 N 0.749
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.749
Bo7g078550 Brassica oleracea Bo7g078550 N 0.746
Bra024875 Brassica rapa Bra024875 N 0.746
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.746
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.746
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.746
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.744
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.743
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.741
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.741
GAI Arabidopsis thaliana AT1G14920 N 0.740
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.740
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.740
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.740
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.740
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.737
Ca_13295 Cicer arietinum Ca_13295 I 0.737
SLR1 Oryza indica BGIOSGA013420 N 0.735
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.735
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.735
OBART03G31370 Oryza barthii OBART03G31370 N 0.735
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.735
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.735
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.735
SLR1 Oryza sativa OS03G0707600 N 0.735
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.732
OB03G38380 Oryza brachyantha OB03G38380 N 0.729
Si039400m.g Setaria italica Si039400m.g N 0.729
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.729
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.729
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.729
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.727
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.727
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.726
mgf025772m Mimulus guttatus mgf025772m N 0.726
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.726
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.725
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.724
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.723
TCM_019165 Theobroma cacao TCM_019165 N 0.723
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.722
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.722
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.721
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.715
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.714