Si039400m.g (Setaria italica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Si039400m.g T201536_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si039400m GRAS 238 617

Links

Other GRAS family TFs
Other Setaria italica TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.989
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.983
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.974
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.950
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.933
F775_03572 Aegilops tauschii F775_03572 N 0.926
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.917
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.917
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.917
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.916
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.912
OB03G38380 Oryza brachyantha OB03G38380 N 0.912
SLR1 Oryza indica BGIOSGA013420 N 0.909
OBART03G31370 Oryza barthii OBART03G31370 N 0.909
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.909
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.909
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.909
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.908
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.906
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.904
SLR1 Oryza sativa OS03G0707600 N 0.904
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.901
TRIUR3_18790 Triticum urartu TRIUR3_18790 N 0.777
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.739
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.736
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.731
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.729
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.729
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.727
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.725
mgf008289m Mimulus guttatus mgf008289m N 0.725
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.722
MDP0000669451 Malus domestica MDP0000669451 I 0.722
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.720
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.719
29692.m000540 Ricinus communis 29692.m000540 N 0.719
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.719
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.719
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.719
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.719
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.719
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.717
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.716
OLONG_002563 Oryza longistaminata OLONG_002563 N 0.716
Pm014329 Prunus mume Pm014329 I 0.716
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.716
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.716
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.715
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.714
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.714
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.714
TCM_019165 Theobroma cacao TCM_019165 N 0.713
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.711
Ca_05046 Cicer arietinum Ca_05046 N 0.711
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.710
TCM_010965 Theobroma cacao TCM_010965 N 0.708
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.708
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.705
Ca_13295 Cicer arietinum Ca_13295 I 0.705
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.705
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.703
PK14700.1 Cannabis sativa PK14700.1 N 0.703
GAI Arabidopsis thaliana AT1G14920 N 0.702
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.702
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.702
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.702
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.702
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.702
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.701
Cla003996 Citrullus lanatus Cla003996 N 0.700