CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G024973
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G024973
T200264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G024973_P01
GRAS
236
621
LVHALLACAEAVQQENFSAADALVKQIPVLASSQGGAMRKVAAYFGEALARRVYRLRPAPDGSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLRPEGGGDTDDEPEVIAVNSVCELHRLLAQPGTLDKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGSGSGSGSGSGQPTDASPPAGTDQVMSEVYLGRQICNIVACEGAERTERHETLVQWRGRLGGSGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G144744
Zea mays
GRMZM2G144744
N
0.953
Traes_4DS_ADBA6E30A
Triticum aestivum
Traes_4DS_ADBA6E30A
N
0.935
Traes_4BS_2EE4988CD
Triticum aestivum
Traes_4BS_2EE4988CD
N
0.933
MLOC_67940
Hordeum vulgare
MLOC_67940
N
0.925
BRADI1G11090
Brachypodium distachyon
BRADI1G11090
N
0.922
Sb01g010660
Sorghum bicolor
Sb01g010660
N
0.917
Pavir.Ia00840
Panicum virgatum
Pavir.Ia00840
N
0.911
Pavir.Ib04357
Panicum virgatum
Pavir.Ib04357
N
0.911
Si039400m.g
Setaria italica
Si039400m.g
N
0.908
SLR1
Oryza indica
BGIOSGA013420
N
0.889
OBART03G31370
Oryza barthii
OBART03G31370
N
0.889
OMERI03G27970
Oryza meridionalis
OMERI03G27970
N
0.889
ONIVA03G32670
Oryza nivara
ONIVA03G32670
N
0.889
ORGLA03G0290200
Oryza glaberrima
ORGLA03G0290200
N
0.889
OGLUM03G31610
Oryza glumaepatula
OGLUM03G31610
N
0.887
OPUNC03G28530
Oryza punctata
OPUNC03G28530
N
0.887
LPERR03G26000
Leersia perrieri
LPERR03G26000
N
0.886
SLR1
Oryza sativa
OS03G0707600
N
0.886
OB03G38380
Oryza brachyantha
OB03G38380
N
0.883
ORUFI03G32650
Oryza rufipogon
ORUFI03G32650
N
0.881
TRIUR3_18790
Triticum urartu
TRIUR3_18790
N
0.789
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.728
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.726
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I
0.725
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.725
LjT15P09.140.nc
Lotus japonicus
LjT15P09.140.nc
N
0.724
LjT40K11.90.nc
Lotus japonicus
LjT40K11.90.nc
N
0.724
AMTR_s00010p00148880
Amborella trichopoda
AMTR_s00010p00148880
N
0.722
MDP0000669451
Malus domestica
MDP0000669451
I
0.719
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.719
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.717
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.717
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.714
29692.m000540
Ricinus communis
29692.m000540
N
0.714
cassava14484.m1
Manihot esculenta
cassava14484.m1
N
0.714
Eucgr.G02163
Eucalyptus grandis
Eucgr.G02163
N
0.714
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
0.711
cassava15077.m1
Manihot esculenta
cassava15077.m1
N
0.711
Lus10033583.g
Linum usitatissimum
Lus10033583.g
N
0.710
Pm014329
Prunus mume
Pm014329
I
0.708
Lus10017626.g
Linum usitatissimum
Lus10017626.g
N
0.708
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.706
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.704
POPTR_0008s13090
Populus trichocarpa
POPTR_0008s13090
N
0.703
GAI1
Vitis vinifera
VIT_01s0011g05260
N
0.703
mgf008289m
Mimulus guttatus
mgf008289m
N
0.703
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.703
OLONG_002563
Oryza longistaminata
OLONG_002563
N
0.700
PGSC0003DMG400015692
Solanum tuberosum
PGSC0003DMG400015692
N
0.700
Solyc11g011260.1
Solanum lycopersicum
Solyc11g011260.1
N
0.700
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.700