CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G144744
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G144744
T200306_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G144744_P01
GRAS
243
623
LVHALLACAEAVQQENFSAAEALVKQIPMLASSQGGAMRKVAAYFGEALARRVYRFRPPPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGDDTDDEPEVIAVNSVFELHRLLAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR
GRMZM2G144744_P02
GRAS
197
577
LVHALLACAEAVQQENFSAAEALVKQIPMLASSQGGAMRKVAAYFGEALARRVYRFRPPPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGDDTDDEPEVIAVNSVFELHRLLAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR
GRMZM2G144744_P03
GRAS
203
232
LVHALLACAEAVQQENFSAAEALVKQIPML
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb01g010660
Sorghum bicolor
Sb01g010660
N
0.967
Pavir.Ia00840
Panicum virgatum
Pavir.Ia00840
N
0.967
Pavir.Ib04357
Panicum virgatum
Pavir.Ib04357
N
0.967
Traes_4DS_ADBA6E30A
Triticum aestivum
Traes_4DS_ADBA6E30A
N
0.963
Traes_4BS_2EE4988CD
Triticum aestivum
Traes_4BS_2EE4988CD
N
0.961
GRMZM2G024973
Zea mays
GRMZM2G024973
N
0.953
MLOC_67940
Hordeum vulgare
MLOC_67940
N
0.953
BRADI1G11090
Brachypodium distachyon
BRADI1G11090
N
0.947
LPERR03G26000
Leersia perrieri
LPERR03G26000
N
0.933
OLONG_002563
Oryza longistaminata
OLONG_002563
N
0.933
SLR1
Oryza sativa
OS03G0707600
N
0.933
Si039400m.g
Setaria italica
Si039400m.g
N
0.933
OGLUM03G31610
Oryza glumaepatula
OGLUM03G31610
N
0.911
OPUNC03G28530
Oryza punctata
OPUNC03G28530
N
0.911
OB03G38380
Oryza brachyantha
OB03G38380
N
0.903
SLR1
Oryza indica
BGIOSGA013420
N
0.900
OBART03G31370
Oryza barthii
OBART03G31370
N
0.900
OMERI03G27970
Oryza meridionalis
OMERI03G27970
N
0.900
ONIVA03G32670
Oryza nivara
ONIVA03G32670
N
0.900
ORGLA03G0290200
Oryza glaberrima
ORGLA03G0290200
N
0.900
ORUFI03G32650
Oryza rufipogon
ORUFI03G32650
N
0.897
TRIUR3_18790
Triticum urartu
TRIUR3_18790
N
0.814
GAI
Arabidopsis thaliana
AT1G14920
N
0.800
GAI
Arabidopsis lyrata
fgenesh2_kg.1__1634__AT1G14920.1
N
0.800
Bostr.7128s0107
Boechera stricta
Bostr.7128s0107
N
0.800
GSMUA_Achr2G22510_001
Musa acuminata
GSMUA_Achr2G22510_001
N
0.767
GAI1
Vitis vinifera
VIT_01s0011g05260
N
0.767
Bostr.7903s0021
Boechera stricta
Bostr.7903s0021
N
0.767
Carubv10018534m.g
Capsella rubella
Carubv10018534m.g
N
0.767
Eucgr.G02163
Eucalyptus grandis
Eucgr.G02163
N
0.767
Gorai.002G177000
Gossypium raimondii
Gorai.002G177000
N
0.767
Bo4g076790
Brassica oleracea
Bo4g076790
N
0.733
Bo7g078550
Brassica oleracea
Bo7g078550
N
0.733
RGA1
Arabidopsis lyrata
fgenesh2_kg.5__65__AT2G01570.1
N
0.733
TCM_010965
Theobroma cacao
TCM_010965
N
0.733
Cla020062
Citrullus lanatus
Cla020062
N
0.733
29692.m000540
Ricinus communis
29692.m000540
N
0.733
cassava15077.m1
Manihot esculenta
cassava15077.m1
N
0.733
Cucsa.006260
Cucumis sativus
Cucsa.006260
N
0.733
Cucsa.280310
Cucumis sativus
Cucsa.280310
N
0.733
mgf025772m
Mimulus guttatus
mgf025772m
N
0.733
Cagra.2098s0043
Capsella grandiflora
Cagra.2098s0043
I
0.733
Cagra.3501s0003
Capsella grandiflora
Cagra.3501s0003
N
0.733
evm.TU.supercontig_2.240
Carica papaya
evm.TU.supercontig_2.240
I
0.733
orange1.1g043131m.g
Citrus sinensis
orange1.1g043131m.g
N
0.733
Thhalv10018436m.g
Eutrema salsugineum
Thhalv10018436m.g
N
0.733
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I
0.731
cassava14484.m1
Manihot esculenta
cassava14484.m1
N
0.731
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.728
AMTR_s00010p00148880
Amborella trichopoda
AMTR_s00010p00148880
N
0.725
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.723
MDP0000669451
Malus domestica
MDP0000669451
I
0.722
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.722
POPTR_0008s13090
Populus trichocarpa
POPTR_0008s13090
N
0.719
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
0.719
mgf008289m
Mimulus guttatus
mgf008289m
N
0.719
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.719
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.717
Pm014329
Prunus mume
Pm014329
I
0.717
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.717
LjT15P09.140.nc
Lotus japonicus
LjT15P09.140.nc
N
0.717
LjT40K11.90.nc
Lotus japonicus
LjT40K11.90.nc
N
0.717
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.714
PGSC0003DMG400015692
Solanum tuberosum
PGSC0003DMG400015692
N
0.711
POPTR_0010s12080
Populus trichocarpa
POPTR_0010s12080
N
0.711
Solyc11g011260.1
Solanum lycopersicum
Solyc11g011260.1
N
0.711
Lus10017626.g
Linum usitatissimum
Lus10017626.g
N
0.711
SapurV1A.0405s0090
Salix purpurea
SapurV1A.0405s0090
N
0.711
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.708
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.708
Lus10033583.g
Linum usitatissimum
Lus10033583.g
N
0.708
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.706
Ca_05046
Cicer arietinum
Ca_05046
N
0.706
Ca_13295
Cicer arietinum
Ca_13295
I
0.706
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.706
SapurV1A.0015s0210
Salix purpurea
SapurV1A.0015s0210
N
0.703
MTR_3g065980
Medicago truncatula
MTR_3g065980
N
0.702
RGL1
Arabidopsis thaliana
AT1G66350
N
0.700
Bra017443
Brassica rapa
Bra017443
N
0.700
28677.m000055
Ricinus communis
28677.m000055
N
0.700
Aquca_091_00032
Aquilegia coerulea
Aquca_091_00032
N
0.700
Bostr.26959s0284
Boechera stricta
Bostr.26959s0284
N
0.700
Cagra.0463s0002
Capsella grandiflora
Cagra.0463s0002
N
0.700
MDP0000237978
Malus domestica
MDP0000237978
N
0.700
MDP0000640034
Malus domestica
MDP0000640034
N
0.700
PK14700.1
Cannabis sativa
PK14700.1
N
0.700