CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RGL1
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT1G66350
T199822_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G66350.1
GRAS
152
506
LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RGL1
Arabidopsis lyrata
fgenesh2_kg.2__868__AT1G66350.1
N
0.966
Bostr.26959s0284
Boechera stricta
Bostr.26959s0284
N
0.903
Carubv10020171m.g
Capsella rubella
Carubv10020171m.g
N
0.903
Cagra.0463s0002
Capsella grandiflora
Cagra.0463s0002
N
0.900
Bra039762
Brassica rapa
Bra039762
N
0.890
Thhalv10018436m.g
Eutrema salsugineum
Thhalv10018436m.g
N
0.865
Bo2g052880
Brassica oleracea
Bo2g052880
N
0.845
Lus10009133.g
Linum usitatissimum
Lus10009133.g
N
0.754
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.722
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.722
MDP0000669451
Malus domestica
MDP0000669451
I
0.718
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.714
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.712
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.709
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.709
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.708
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.708
Pm014329
Prunus mume
Pm014329
I
0.707
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.706
TCM_019165
Theobroma cacao
TCM_019165
N
0.705
F775_03572
Aegilops tauschii
F775_03572
N
0.704
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.703
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.703
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
0.701
GRMZM2G144744
Zea mays
GRMZM2G144744
N
0.700