CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4170s0002
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.4170s0002
T202332_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4170s0002.1.p
GRAS
279
666
SRQTVMEIATAIAEGKTEIASEILASVSQTPNLRRNSEEKLVDFMVTALRHRINNPAESLPSPATELYGKEHLLSTQLLYELSPCFKLGFMAANLAILDAAGNNDEGVINLHVIDFDIGEGGQYVHLLHALSTRRNGNSQNTKTPVVKITAVTNNSDGFVVGDGGEERLKAVGDLLSQLGDRLGISVSFNVVASLRLGDLSRESLGCDPDEPLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLNPRVVTIVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSSNTDRGKVEEGIGRKIVNAVACEGMDRIERCEVFGKWRMRMSMAGFELMASSEKIAESMKSRLSNNNGKRVHSGFTVKEDNGGVCFGWMGRTLAVASAWR
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
dwg
Drosophila melanogaster
FBgn0000520
N
GF22454
Drosophila ananassae
FBgn0099450
N
GG18627
Drosophila erecta
FBgn0110837
N
GH17759
Drosophila grimshawi
FBgn0125229
N
GI15092
Drosophila mojavensis
FBgn0137842
N
GJ18900
Drosophila virilis
FBgn0206046
N
GK25520
Drosophila willistoni
FBgn0227479
N
GE16280
Drosophila yakuba
FBgn0233816
N
GA28407
Drosophila pseudoobscura
FBgn0249767
N