CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene13212-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene13212-v1.0-hybrid
T202562_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna13212.1-v1.0-hybrid
GRAS
308
676
SKQSLMEAASAISEGKSEAAAEILTRLTQVTSPIPNSEQRLLEFMASALKSRVNPADNPPPVKALFTQEHAGSTQFLYELLPCYGLGFMAANLAILEATLADQSTTNKVHVIDFDIGQGGQYMHLLQALSRRQNGKPSAVKITTVADNGGGEERLRTVRENLNQVAKELRVGLEFNVVGHKLSELNRESLGCEPDEPIAVNFAFKLYSMPDESVSTDNPRDELLRRVKGLAPRVVTLVEQELNTNTAPFMARVNECCAYYGALLESIEAVAKDHPDRAKAEEALSRKLANSVACEGRDRVERCEVFGKWRARMGMAGFELRAMSQSVTESLKRLSSGKCVNPGFTVKEQNGAVCFGWISRTLTVASAWR
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002688mg
Prunus persica
PRUPE_ppa002688mg
N
0.796
Pm019863
Prunus mume
Pm019863
N
0.785
30169.m006225
Ricinus communis
30169.m006225
N
0.708
Ciclev10004502m.g
Citrus clementina
Ciclev10004502m.g
N
0.704
MDP0000315706
Malus domestica
MDP0000315706
N
0.777
orange1.1g041667m.g
Citrus sinensis
orange1.1g041667m.g
N
0.704