CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10014822.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10014822.g
T202706_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10014822
GRAS
107
494
LIHLLLITATAIDEGNSNSALENLADLYRSVSLVGDSVQRVVAQFADGLSARLLTRKSPFYEMIMKRPTAEEEFLAFTDLYKVSPCYQFAHFTANQSIVEAFEREETVNGRALHVVDFDVSYGLQWPSLIQSISDRATASNRISLRVTGFSRSLEEMRETESRLVSFAKGFRNLVFEFQGLLRGSKLVNLRKRKNETVAVNLVFHLNTLADASAVSNTLKSINALNPSVVVLVEHEGYRNSKMFLPRFMESLHYFAAMFDSLDDCLPLESPERLRIEKNLLGNEIKTILNCDKDRRHSDSKNHGPLLRYEKVESWKGRMEGHGFRGLKLSSSTLIQAKLLLKIRAHYGPTVGDADDVGGGFRVFQKDDGKAISLGWQDRCLLTASAWT
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_072860
Albugo laibachii
ALNC14_072860
N
F443_19384
Phytophthora parasitica
F443_19384
N
fgenesh_scip_prom.46568.8242
Phytophthora kernoviae
fgenesh_scip_prom.46568.8242
N
maker-pag1_scaffold_682-fgenesh-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_682-fgenesh-gene-0.3
N
maker-par_contig_783-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_783-fgenesh-gene-0.2
N
maker-pve_contig_680-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_680-fgenesh-gene-0.1
N
Phyra79242
Phytophthora ramorum
Phyra79242
N
Physo139144
Phytophthora sojae
Physo139144
N
PYU1_G004417
Pythium ultimum
PYU1_G004417
N
gw1.8.238.1
Phytophthora capsici
gw1.8.238.1
N