CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Lus10014822.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10014822.g
T202706_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10014822
GRAS
107
494
LIHLLLITATAIDEGNSNSALENLADLYRSVSLVGDSVQRVVAQFADGLSARLLTRKSPFYEMIMKRPTAEEEFLAFTDLYKVSPCYQFAHFTANQSIVEAFEREETVNGRALHVVDFDVSYGLQWPSLIQSISDRATASNRISLRVTGFSRSLEEMRETESRLVSFAKGFRNLVFEFQGLLRGSKLVNLRKRKNETVAVNLVFHLNTLADASAVSNTLKSINALNPSVVVLVEHEGYRNSKMFLPRFMESLHYFAAMFDSLDDCLPLESPERLRIEKNLLGNEIKTILNCDKDRRHSDSKNHGPLLRYEKVESWKGRMEGHGFRGLKLSSSTLIQAKLLLKIRAHYGPTVGDADDVGGGFRVFQKDDGKAISLGWQDRCLLTASAWT
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10017908.g
Linum usitatissimum
Lus10017908.g
N
0.930
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
0.761
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
0.756
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
0.740
SapurV1A.0179s0200
Salix purpurea
SapurV1A.0179s0200
N
0.740
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N
0.737
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
0.736
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
0.734
29728.m000844
Ricinus communis
29728.m000844
N
0.728
TCM_036707
Theobroma cacao
TCM_036707
N
0.725
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
0.714
Pm022208
Prunus mume
Pm022208
N
0.711
cassava25355.m1
Manihot esculenta
cassava25355.m1
N
0.703
MDP0000203826
Malus domestica
MDP0000203826
N
0.702