POPTR_0019s11540 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0019s11540 T201256_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s11540.1 GRAS 82 460

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0013s11930 Populus trichocarpa POPTR_0013s11930 N 0.933
SapurV1A.0179s0200 Salix purpurea SapurV1A.0179s0200 N 0.899
SapurV1A.2874s0010 Salix purpurea SapurV1A.2874s0010 N 0.896
cassava27916.m1 Manihot esculenta cassava27916.m1 N 0.857
TCM_036707 Theobroma cacao TCM_036707 N 0.851
PRUPE_ppa017519mg Prunus persica PRUPE_ppa017519mg N 0.846
Gorai.009G289600 Gossypium raimondii Gorai.009G289600 N 0.843
Pm022208 Prunus mume Pm022208 N 0.837
29728.m000844 Ricinus communis 29728.m000844 N 0.829
MDP0000203826 Malus domestica MDP0000203826 N 0.826
Eucgr.F02630 Eucalyptus grandis Eucgr.F02630 N 0.809
MDP0000162468 Malus domestica MDP0000162468 N 0.803
MDP0000169115 Malus domestica MDP0000169115 N 0.803
MDP0000512470 Malus domestica MDP0000512470 N 0.803
cassava25355.m1 Manihot esculenta cassava25355.m1 N 0.798
Ciclev10003213m.g Citrus clementina Ciclev10003213m.g N 0.784
orange1.1g041748m.g Citrus sinensis orange1.1g041748m.g N 0.778
gene27489-v1.0-hybrid Fragaria vesca gene27489-v1.0-hybrid N 0.776
VIT_18s0076g00200 Vitis vinifera VIT_18s0076g00200 N 0.762
chr5.LjT08L18.130.nd Lotus japonicus chr5.LjT08L18.130.nd N 0.761
GLYMA10G35920 Glycine max GLYMA10G35920 N 0.758
Lus10014822.g Linum usitatissimum Lus10014822.g N 0.756
GLYMA20G31680 Glycine max GLYMA20G31680 N 0.750
Lus10017908.g Linum usitatissimum Lus10017908.g N 0.747
Ca_04298 Cicer arietinum Ca_04298 N 0.739
GLYMA02G08241 Glycine max GLYMA02G08241 N 0.736
GLYMA16G27310 Glycine max GLYMA16G27310 N 0.736
MTR_1g096030 Medicago truncatula MTR_1g096030 N 0.728
evm.TU.supercontig_66.59 Carica papaya evm.TU.supercontig_66.59 N 0.725
mgf023389m Mimulus guttatus mgf023389m N 0.722
Aquca_023_00050 Aquilegia coerulea Aquca_023_00050 N 0.719
Gorai.005G075100 Gossypium raimondii Gorai.005G075100 N 0.708