CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_18s0076g00200
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_18s0076g00200
T201851_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_18s0076g00200.t01
GRAS
24
295
LIHLLLITATAVDENNVSVAAENLRELYQSVCLNGDSVQRVVAYFADGLAAKLLTRKSPFYDMIMKEPTPEEEFLAHTDLYRVSPYYQFAHFTANQAIIEAFEEEEENNNRALHVVDFDVSYGFQWPSLIQSLAEKATSGNRISLRITGFGRSLDELQETETRLISFSKAFRNLVFEFQGLLRGSKLTNLRKKKNETVAANLVFHLNTLTSFLKISETLKSVHSLNPSIVILVEQEGSRSPQSFLSRFMESLHYFAAMFDSLDDCLPLEKSG
VIT_18s0076g00200.t01
GRAS
289
324
LPLEKSGGFRVFERDDERAISLGWQDRCLITASAWH
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
0.762
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
0.762
TCM_036707
Theobroma cacao
TCM_036707
N
0.758
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
0.758
Pm022208
Prunus mume
Pm022208
N
0.755
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
0.752
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
0.745
MDP0000203826
Malus domestica
MDP0000203826
N
0.745
gene27489-v1.0-hybrid
Fragaria vesca
gene27489-v1.0-hybrid
N
0.732
29728.m000844
Ricinus communis
29728.m000844
N
0.728
SapurV1A.0179s0200
Salix purpurea
SapurV1A.0179s0200
N
0.725
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N
0.725
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
0.721
MDP0000162468
Malus domestica
MDP0000162468
N
0.715
MDP0000169115
Malus domestica
MDP0000169115
N
0.715
MDP0000512470
Malus domestica
MDP0000512470
N
0.715
Ciclev10003213m.g
Citrus clementina
Ciclev10003213m.g
N
0.708
orange1.1g041748m.g
Citrus sinensis
orange1.1g041748m.g
N
0.708