CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA02G08241
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA02G08241
T200145_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G08241.1
GRAS
88
474
LIHLLLSTATAVDDDQRNYCAALENLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTKKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEEERNNKALHVIDFDISYGFQWPSLIQSLSQKATSGKRIFLRITGFGNNLKELQETEARLVSFSKGFGNHLVFEFQGILRGSSRAFNLRKRKNEIVAVNLVSYLNTLSSFMKVSHTLGFVHSLSPSIVVLVKQEGSCRSLKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKQLLGKEIKSMLNYDMDDGVEYYCPKYERMETWKGRMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGGGFRVSERDEGRVISLGWQNRFLLTVSAWQ
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA16G27310
Glycine max
GLYMA16G27310
N
0.888
GLYMA10G35920
Glycine max
GLYMA10G35920
N
0.830
GLYMA20G31680
Glycine max
GLYMA20G31680
N
0.830
chr5.LjT08L18.130.nd
Lotus japonicus
chr5.LjT08L18.130.nd
N
0.816
Ca_04298
Cicer arietinum
Ca_04298
N
0.782
MTR_1g096030
Medicago truncatula
MTR_1g096030
N
0.777
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
0.749
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
0.740
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
0.736
29728.m000844
Ricinus communis
29728.m000844
N
0.729
cassava25355.m1
Manihot esculenta
cassava25355.m1
N
0.726
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
0.721
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
0.719
Ciclev10003213m.g
Citrus clementina
Ciclev10003213m.g
N
0.718
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
0.718
Pm022208
Prunus mume
Pm022208
N
0.715
orange1.1g041748m.g
Citrus sinensis
orange1.1g041748m.g
N
0.712
TCM_036707
Theobroma cacao
TCM_036707
N
0.707
MDP0000203826
Malus domestica
MDP0000203826
N
0.705
SapurV1A.0179s0200
Salix purpurea
SapurV1A.0179s0200
N
0.704
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N
0.701