Pavir.Ga01057 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ga01057 T202996_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01057.1.p GRAS 358 717
Pavir.Ga01057.2.p GRAS 358 717

Links

Other GRAS family TFs
Other Panicum virgatum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI04G22740 Oryza rufipogon ORUFI04G22740 N 0.869
ONIVA02G29390 Oryza nivara ONIVA02G29390 N 0.819
ONIVA06G04040 Oryza nivara ONIVA06G04040 N 0.869
OPUNC02G24500 Oryza punctata OPUNC02G24500 N 0.813
OPUNC04G18860 Oryza punctata OPUNC04G18860 N 0.870
ORGLA02G0231500 Oryza glaberrima ORGLA02G0231500 N 0.782
ORGLA02G0231600 Oryza glaberrima ORGLA02G0231600 N 0.819
ORGLA04G0182200 Oryza glaberrima ORGLA04G0182200 N 0.869
ORUFI02G28320 Oryza rufipogon ORUFI02G28320 N 0.788
ORUFI02G28330 Oryza rufipogon ORUFI02G28330 N 0.819
OMERI04G17630 Oryza meridionalis OMERI04G17630 N 0.870
OS02G0662700 Oryza sativa OS02G0662700 N 0.788
OS02G0663100 Oryza sativa OS02G0663100 N 0.822
OS04G0555000 Oryza sativa OS04G0555000 N 0.869
Sb04g032570 Sorghum bicolor Sb04g032570 N 0.785
Sb04g032590 Sorghum bicolor Sb04g032590 N 0.785
Sb06g024820 Sorghum bicolor Sb06g024820 N 0.909
Si016508m.g Setaria italica Si016508m.g N 0.799
OB02G34120 Oryza brachyantha OB02G34120 N 0.793
BGIOSGA008764 Oryza indica BGIOSGA008764 N 0.819
BRADI3G50930 Brachypodium distachyon BRADI3G50930 N 0.836
F775_27777 Aegilops tauschii F775_27777 N 0.816
GRMZM2G037792 Zea mays GRMZM2G037792 N 0.901
GRMZM2G098800 Zea mays GRMZM2G098800 N 0.785
GRMZM2G110579 Zea mays GRMZM2G110579 N 0.745
GRMZM5G825321 Zea mays GRMZM5G825321 N 0.924
MLOC_43989 Hordeum vulgare MLOC_43989 N 0.827
BGIOSGA008763 Oryza indica BGIOSGA008763 N 0.785
OB02G34130 Oryza brachyantha OB02G34130 N 0.839
OBART02G26880 Oryza barthii OBART02G26880 N 0.782
OBART02G26890 Oryza barthii OBART02G26890 N 0.819
OBART04G21150 Oryza barthii OBART04G21150 N 0.869
OGLUM02G27370 Oryza glumaepatula OGLUM02G27370 N 0.782
OGLUM02G27380 Oryza glumaepatula OGLUM02G27380 N 0.822
OGLUM04G21070 Oryza glumaepatula OGLUM04G21070 N 0.839
OLONG_010301 Oryza longistaminata OLONG_010301 N 0.867