Pavir.Ib00589 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ib00589 T203029_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib00589.1.p GRAS 165 536

Links

Other GRAS family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.774
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.873
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.832
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.876
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.832
OS03G0193000 Oryza sativa OS03G0193000 N 0.876
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.938
Si035052m.g Setaria italica Si035052m.g N 0.805
Si035089m.g Setaria italica Si035089m.g N 0.976
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.738
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.843
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.841
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.824
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.811
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.770
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.811
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.808
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.784
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.765
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.814
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.841
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.805
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.970
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.803
OB03G16920 Oryza brachyantha OB03G16920 N 0.876
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.830
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.795
F775_08653 Aegilops tauschii F775_08653 N 0.841
F775_26780 Aegilops tauschii F775_26780 N 0.813
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.922
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.794
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.922
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.865
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.819
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.841
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.800
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.876
OB10G15940 Oryza brachyantha OB10G15940 N 0.819
OBART03G06740 Oryza barthii OBART03G06740 N 0.873
OBART10G07700 Oryza barthii OBART10G07700 N 0.832
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.876
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.832
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.832
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.873
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.830
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.876
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.827