CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib03902
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ib03902
T203035_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib03902.1.p
GRAS
306
674
LRTLLIHCAQAVSVNNHTLASDILSIIRQHASTSGDDSQRLAFCLADCLEVRLAGTGSQLYRKMMAKRRKAVDILKVFHLCIAISPFLRVPYYFSNKTIIDVSKGKPRVHIIDFGICFGFQWPSLFEQHAKREGGPPMVRITGIEQPQPGFRPNESSKNTGPRLADYASMFNIPFEYQGISSKWETIKIDDFKIEKDDVVIVNCIYCLKNLGDETVSINSARNRVLNTIRMLKPKVFIHGVVNGSYITPFFLTRFKKVMYHHSALFDVIDKTLPRDAEARMILERDIYRSTVLNVIACEGSERIERPESYKKWKLRNKKAGFEQLQLNPDTVEGTRAMVKQYHKDFVINEDDQWLLLGWKGRILYGMAT
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA007250
Oryza indica
BGIOSGA007250
N
OBART02G01180
Oryza barthii
OBART02G01180
N
OGLUM02G01050
Oryza glumaepatula
OGLUM02G01050
N
OLONG_000270
Oryza longistaminata
OLONG_000270
N
ONIVA02G01060
Oryza nivara
ONIVA02G01060
N
OPUNC02G00620
Oryza punctata
OPUNC02G00620
N
ORGLA02G0010700
Oryza glaberrima
ORGLA02G0010700
N
ORUFI02G01170
Oryza rufipogon
ORUFI02G01170
N