Pavir.J16280 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J16280 T203059_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J16280.1.p GRAS 16 398

Links

Other GRAS family TFs
Other Panicum virgatum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I
Si029351m.g Setaria italica Si029351m.g I
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I
TCM_023889 Theobroma cacao TCM_023889 I
Traes_2BS_169BEF991 Triticum aestivum Traes_2BS_169BEF991 I
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I
TRIUR3_00571 Triticum urartu TRIUR3_00571 I
TRIUR3_02784 Triticum urartu TRIUR3_02784 I
Ca_08103 Cicer arietinum Ca_08103 I
Pm016493 Prunus mume Pm016493 I
29940.m000398 Ricinus communis 29940.m000398 I
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I
mgf013640m Mimulus guttatus mgf013640m I
Sb02g041070 Sorghum bicolor Sb02g041070 I
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I
MDP0000138811 Malus domestica MDP0000138811 I
MDP0000180785 Malus domestica MDP0000180785 I
MDP0000270677 Malus domestica MDP0000270677 I
MDP0000299504 Malus domestica MDP0000299504 I
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I
Pavir.Ba00049 Panicum virgatum Pavir.Ba00049 I
Pavir.J09096 Panicum virgatum Pavir.J09096 I
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I
PK07115.1 Cannabis sativa PK07115.1 I
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I
MTR_7g088890 Medicago truncatula MTR_7g088890 I
BGIOSGA026248 Oryza indica BGIOSGA026248 I
Bo4g012880 Brassica oleracea Bo4g012880 I
Bra023224 Brassica rapa Bra023224 I
Bra034147 Brassica rapa Bra034147 I
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I
F775_09858 Aegilops tauschii F775_09858 I
F775_10026 Aegilops tauschii F775_10026 I
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I
LPERR07G21050 Leersia perrieri LPERR07G21050 I
MLOC_42759 Hordeum vulgare MLOC_42759 I
MLOC_58500 Hordeum vulgare MLOC_58500 I
BZIP49 Arabidopsis thaliana AT3G56660 I
OB07G29670 Oryza brachyantha OB07G29670 I
OBART07G24080 Oryza barthii OBART07G24080 I
OGLUM07G24220 Oryza glumaepatula OGLUM07G24220 I
OLONG_012651 Oryza longistaminata OLONG_012651 I
OMERI07G20490 Oryza meridionalis OMERI07G20490 I
ONIVA07G23980 Oryza nivara ONIVA07G23980 I
OPUNC07G22690 Oryza punctata OPUNC07G22690 I
ORGLA07G0187400 Oryza glaberrima ORGLA07G0187400 I
ORUFI07G25260 Oryza rufipogon ORUFI07G25260 I
BZIP60 Oryza sativa OS07G0644100 I
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I
GRMZM2G060109 Zea mays GRMZM2G060109 N