TGA1B_TOBAC (Nicotiana tabacum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 TGA1B_TOBAC T070492_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1B_TOBAC
M10083_2.00		 Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1B_01		 (Direct) (Direct)
TGA1B_TOBAC
M10084_2.00		 Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1B_Q2		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP17
M01778_2.00 		Arabidopsis thaliana
NNHBACGYRN
NYRCGTVDNN		 PBM
Weirauch et al.(2014)
pTH7221 		0.847 0.806
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TGA1B_TOBAC bZIP 181 242

Links

Other bZIP family TFs
Other Nicotiana tabacum TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I 0.874
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I 0.874
Bo4g012880 Brassica oleracea Bo4g012880 I 0.866
MDP0000138811 Malus domestica MDP0000138811 I 0.863
MDP0000299504 Malus domestica MDP0000299504 I 0.863
PK07115.1 Cannabis sativa PK07115.1 I 0.860
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I 0.858
mgf013640m Mimulus guttatus mgf013640m I 0.849
BZIP17 Arabidopsis thaliana AT2G40950 D 0.847
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I 0.847
BZIP17 Arabidopsis lyrata scaffold_402899.1 I 0.847
mgf002378m Mimulus guttatus mgf002378m I 0.847
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I 0.847
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I 0.847
Carubv10022722m.g Capsella rubella Carubv10022722m.g I 0.847
Lus10010440.g Linum usitatissimum Lus10010440.g I 0.847
Lus10012104.g Linum usitatissimum Lus10012104.g I 0.847
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I 0.847
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I 0.844
BZIP49 Arabidopsis thaliana AT3G56660 I 0.842
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I 0.841
Pm016493 Prunus mume Pm016493 I 0.841
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I 0.841
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I 0.841
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I 0.839
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I 0.838
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I 0.837
MTR_7g088890 Medicago truncatula MTR_7g088890 I 0.835
Ca_08103 Cicer arietinum Ca_08103 I 0.835
29940.m000398 Ricinus communis 29940.m000398 I 0.835
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I 0.835
TCM_023889 Theobroma cacao TCM_023889 I 0.828
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I 0.828
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I 0.827
Bo4g190610 Brassica oleracea Bo4g190610 I 0.826
Bra016959 Brassica rapa Bra016959 I 0.826
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I 0.826
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I 0.826
MDP0000180785 Malus domestica MDP0000180785 I 0.826
MDP0000270677 Malus domestica MDP0000270677 I 0.826
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I 0.825
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I 0.823
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I 0.823
Cla017717 Citrullus lanatus Cla017717 I 0.820
Cucsa.337510 Cucumis sativus Cucsa.337510 I 0.820
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I 0.812
Lus10027290.g Linum usitatissimum Lus10027290.g I 0.808
Lus10038995.g Linum usitatissimum Lus10038995.g I 0.808
F775_09858 Aegilops tauschii F775_09858 I 0.806
MLOC_58500 Hordeum vulgare MLOC_58500 I 0.806
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I 0.806
TRIUR3_00571 Triticum urartu TRIUR3_00571 I 0.806
BGIOSGA026248 Oryza indica BGIOSGA026248 I 0.797
BRADI1G19702 Brachypodium distachyon BRADI1G19702 I 0.797
LPERR07G21050 Leersia perrieri LPERR07G21050 I 0.797
OBART07G24080 Oryza barthii OBART07G24080 I 0.797
OGLUM07G24220 Oryza glumaepatula OGLUM07G24220 I 0.797
OLONG_012651 Oryza longistaminata OLONG_012651 I 0.797
OMERI07G20490 Oryza meridionalis OMERI07G20490 I 0.797
ONIVA07G23980 Oryza nivara ONIVA07G23980 I 0.797
OPUNC07G22690 Oryza punctata OPUNC07G22690 I 0.797
ORGLA07G0187400 Oryza glaberrima ORGLA07G0187400 I 0.797
ORUFI07G25260 Oryza rufipogon ORUFI07G25260 I 0.797
BZIP60 Oryza sativa OS07G0644100 I 0.797
Sb02g041070 Sorghum bicolor Sb02g041070 I 0.797
Si029351m.g Setaria italica Si029351m.g I 0.797
Pavir.Ba00049 Panicum virgatum Pavir.Ba00049 I 0.797
Pavir.J09096 Panicum virgatum Pavir.J09096 I 0.797
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I 0.795
Traes_2BS_169BEF991 Triticum aestivum Traes_2BS_169BEF991 I 0.795
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I 0.793
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I 0.789
GLYMA19G30681 Glycine max GLYMA19G30681 I 0.787
OB07G29670 Oryza brachyantha OB07G29670 I 0.787
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I 0.786
GLYMA03G27865 Glycine max GLYMA03G27865 I 0.785
Bra023224 Brassica rapa Bra023224 I 0.784
Bra034147 Brassica rapa Bra034147 I 0.784