CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr1.CM1255.400.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
chr1.CM1255.400.nc
T203271_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.CM1255.400.nc
GRAS
451
807
LLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTPLSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFDREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFASKLGLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ff-7
Neurospora crassa
NCU04001
D
CTRG_03493
Candida tropicalis
CTRG_03493
I
AB00587.1
Alternaria brassicicola
AB00587.1
I
scaffold_6-snap.550.1
Neurospora discreta
scaffold_6-snap.550.1
I
estExt_fgenesh1_pg.C_20387
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20387
I
Z517_01830
Fonsecaea pedrosoi
Z517_01830
I
SMAC_06177
Sordaria macrospora
SMAC_06177
I
PV11_06966
Exophiala sideris
PV11_06966
I
PTT_17743
Pyrenophora teres
PTT_17743
I
PTRG_08944
Pyrenophora triticirepentis
PTRG_08944
I
NEUTE1DRAFT_49802
Neurospora tetrasperma
NEUTE1DRAFT_49802
I
LEMA_P036570.1
Leptosphaeria maculans
LEMA_P036570.1
I
G210_5732
Candida maltosa
G210_5732
I
COCVIDRAFT_12975
Bipolaris victoriae
COCVIDRAFT_12975
I
COCSADRAFT_166493
Bipolaris sorokiniana
COCSADRAFT_166493
I
COCMIDRAFT_81410
Bipolaris oryzae
COCMIDRAFT_81410
I
COCCADRAFT_9692
Bipolaris zeicola
COCCADRAFT_9692
I
COCC4DRAFT_156489
Bipolaris maydis
COCC4DRAFT_156489
I
CD36_10810
Candida dubliniensis
CD36_10810
I
CaO19.1168
Candida albicans
CaO19.1168
I
CD36_07140
Candida dubliniensis
CD36_07140
I
CaO19.8813
Candida albicans
CaO19.8813
I
CaO19.1227
Candida albicans
CaO19.1227
I
CaO19.8761
Candida albicans
CaO19.8761
I
SNOG_08674
Stagonospora nodorum
SNOG_08674
N
CANTEDRAFT_115466
Candida tenuis
CANTEDRAFT_115466
N
Z519_11506
Cladophialophora bantiana
Z519_11506
N
SNOG_08674
Phaeosphaeria nodorum
SNOG_08674
N
PV06_08981
Exophiala oligosperma
PV06_08981
N
CLUG_05915
Clavispora lusitaniae
CLUG_05915
N
CLUG_05915
Candida lusitaniae
CLUG_05915
N