chr1.CM1255.400.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr1.CM1255.400.nc T203271_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM1255.400.nc GRAS 451 807

Links

Other GRAS family TFs
Other Lotus japonicus TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.975
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.972
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.966
Ca_09530 Cicer arietinum Ca_09530 N 0.966
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.922
PK22310.1 Cannabis sativa PK22310.1 N 0.922
SCR Vitis vinifera VIT_08s0056g00050 N 0.919
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.916
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.914
30073.m002204 Ricinus communis 30073.m002204 N 0.914
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.911
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.911
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.911
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.911
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.903
TCM_017746 Theobroma cacao TCM_017746 N 0.903
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.898
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.896
Pm002956 Prunus mume Pm002956 N 0.895
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.895
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.892
MDP0000397638 Malus domestica MDP0000397638 N 0.889
Cla012346 Citrullus lanatus Cla012346 N 0.884
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.883
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.881
mgf012242m Mimulus guttatus mgf012242m N 0.877
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.875
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.875
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.875
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.874
PK17372.1 Cannabis sativa PK17372.1 N 0.874
SCR Arabidopsis thaliana AT3G54220 N 0.871
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.871
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.871
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.871
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.871
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.867
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.867
Bo8g083500 Brassica oleracea Bo8g083500 N 0.864
Bra007056 Brassica rapa Bra007056 N 0.856
MLOC_79758 Hordeum vulgare MLOC_79758 N 0.839
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.835
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.833
TRIUR3_28106 Triticum urartu TRIUR3_28106 N 0.826
Pavir.J19041 Panicum virgatum Pavir.J19041 N 0.824
OBART12G01190 Oryza barthii OBART12G01190 N 0.821
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.821
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.821
OGLUM12G01020 Oryza glumaepatula OGLUM12G01020 N 0.820
ONIVA11G01600 Oryza nivara ONIVA11G01600 N 0.820
OPUNC11G01240 Oryza punctata OPUNC11G01240 N 0.820
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.820
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.811
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.809
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.809
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.809
SCR1 Oryza sativa OS11G0124300 N 0.809
SCR2 Oryza sativa OS12G0122000 N 0.809
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.805
OB11G11140 Oryza brachyantha OB11G11140 N 0.803
OB12G11340 Oryza brachyantha OB12G11340 N 0.803
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N 0.802
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.801
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N 0.800
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.798
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.796
F775_14336 Aegilops tauschii F775_14336 N 0.794
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.793
OBART11G01460 Oryza barthii OBART11G01460 N 0.792
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.792
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.791
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.790
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.789
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.789
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.786
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.785
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.781
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.781
Pavir.J23622 Panicum virgatum Pavir.J23622 N 0.767
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.758
Traes_2AS_455BD2CA1 Triticum aestivum Traes_2AS_455BD2CA1 N 0.727
OB07G24850 Oryza brachyantha OB07G24850 N 0.719
OS07G0567700 Oryza sativa OS07G0567700 N 0.719
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.713