SCR (Arabidopsis lyrata)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 fgenesh2_kg.5__1811__AT3G54220.1 T200127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1811__AT3G54220.1 GRAS 283 643

Links

Other GRAS family TFs
Other Arabidopsis lyrata TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCR Arabidopsis thaliana AT3G54220 N 1.000
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 1.000
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 1.000
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 1.000
Bo8g083500 Brassica oleracea Bo8g083500 N 0.992
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.992
Bra007056 Brassica rapa Bra007056 N 0.990
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.906
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.905
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.905
30073.m002204 Ricinus communis 30073.m002204 N 0.903
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.903
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.894
TCM_017746 Theobroma cacao TCM_017746 N 0.891
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.889
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.889
PK22310.1 Cannabis sativa PK22310.1 N 0.888
Pm002956 Prunus mume Pm002956 N 0.886
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.886
MDP0000397638 Malus domestica MDP0000397638 N 0.884
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.883
SCR Vitis vinifera VIT_08s0056g00050 N 0.882
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.880
Cla012346 Citrullus lanatus Cla012346 N 0.873
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.871
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.870
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.869
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.867
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.866
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.866
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.864
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.863
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.862
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.861
PK17372.1 Cannabis sativa PK17372.1 N 0.854
Ca_09530 Cicer arietinum Ca_09530 N 0.853
mgf012242m Mimulus guttatus mgf012242m N 0.852
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.852
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.846
TRIUR3_28106 Triticum urartu TRIUR3_28106 N 0.826
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.812
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.812
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.811
OGLUM12G01020 Oryza glumaepatula OGLUM12G01020 N 0.810
ONIVA11G01600 Oryza nivara ONIVA11G01600 N 0.806
OPUNC11G01240 Oryza punctata OPUNC11G01240 N 0.806
Pavir.J19041 Panicum virgatum Pavir.J19041 N 0.803
MLOC_79758 Hordeum vulgare MLOC_79758 N 0.802
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.801
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N 0.798
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N 0.796
OB11G11140 Oryza brachyantha OB11G11140 N 0.795
OB12G11340 Oryza brachyantha OB12G11340 N 0.795
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.791
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.790
OBART12G01190 Oryza barthii OBART12G01190 N 0.789
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.789
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.789
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.789
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.786
F775_14336 Aegilops tauschii F775_14336 N 0.785
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.784
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.784
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.784
SCR1 Oryza sativa OS11G0124300 N 0.784
SCR2 Oryza sativa OS12G0122000 N 0.784
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.779
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.773
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.770
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.770
OBART11G01460 Oryza barthii OBART11G01460 N 0.767
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.762
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.762
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.760
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.759
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.756
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.753
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.751
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.727
Traes_2AS_455BD2CA1 Triticum aestivum Traes_2AS_455BD2CA1 N 0.727
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.727
OB07G24850 Oryza brachyantha OB07G24850 N 0.719
OS07G0567700 Oryza sativa OS07G0567700 N 0.719
Pavir.J23622 Panicum virgatum Pavir.J23622 N 0.717