Pm002956 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm002956 T201956_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002956 GRAS 476 836

Links

Other GRAS family TFs
Other Prunus mume TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.997
MDP0000397638 Malus domestica MDP0000397638 N 0.967
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.958
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.933
PK22310.1 Cannabis sativa PK22310.1 N 0.933
30073.m002204 Ricinus communis 30073.m002204 N 0.930
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.930
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.930
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.930
SCR Vitis vinifera VIT_08s0056g00050 N 0.927
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.922
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.920
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.917
TCM_017746 Theobroma cacao TCM_017746 N 0.914
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.911
Cla012346 Citrullus lanatus Cla012346 N 0.906
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.903
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.897
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.896
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.895
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.892
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.889
SCR Arabidopsis thaliana AT3G54220 N 0.886
Bo8g083500 Brassica oleracea Bo8g083500 N 0.886
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.886
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.886
Ca_09530 Cicer arietinum Ca_09530 N 0.886
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.886
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.886
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.886
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.884
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.884
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.883
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.875
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.875
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.875
mgf012242m Mimulus guttatus mgf012242m N 0.867
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.863
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.841
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.837
OBART12G01190 Oryza barthii OBART12G01190 N 0.827
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.827
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.825
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.823
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.823
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.823
SCR1 Oryza sativa OS11G0124300 N 0.823
SCR2 Oryza sativa OS12G0122000 N 0.823
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.817
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.815
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.814
OBART11G01460 Oryza barthii OBART11G01460 N 0.806
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.806
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.805
F775_14336 Aegilops tauschii F775_14336 N 0.804
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.804
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.801
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.801
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.798
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.798
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.798
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.790
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.789
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.781
Bra007056 Brassica rapa Bra007056 N 0.770
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.758
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.733
OB07G24850 Oryza brachyantha OB07G24850 N 0.719
OS07G0567700 Oryza sativa OS07G0567700 N 0.719
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.717