PGSC0003DMG400016833 (Solanum tuberosum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 PGSC0003DMG400016833 T201128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400043358 GRAS 447 807

Links

Other GRAS family TFs
Other Solanum tuberosum TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.986
SCR Vitis vinifera VIT_08s0056g00050 N 0.905
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.900
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.897
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.897
30073.m002204 Ricinus communis 30073.m002204 N 0.895
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.889
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.889
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.889
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.889
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.886
Pm002956 Prunus mume Pm002956 N 0.886
MDP0000397638 Malus domestica MDP0000397638 N 0.881
mgf012242m Mimulus guttatus mgf012242m N 0.878
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.878
TCM_017746 Theobroma cacao TCM_017746 N 0.875
Cla012346 Citrullus lanatus Cla012346 N 0.875
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.875
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.873
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.869
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.867
Ca_09530 Cicer arietinum Ca_09530 N 0.864
SCR Arabidopsis thaliana AT3G54220 N 0.862
Bo8g083500 Brassica oleracea Bo8g083500 N 0.862
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.862
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.862
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.862
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.862
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.862
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.859
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.859
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.859
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.856
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.856
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.845
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.844
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.834
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.812
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.809
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.809
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.806
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.806
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.806
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.806
SCR1 Oryza sativa OS11G0124300 N 0.806
SCR2 Oryza sativa OS12G0122000 N 0.806
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.806
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.802
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.801
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.798
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.795
OBART11G01460 Oryza barthii OBART11G01460 N 0.789
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.787
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.778
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.771
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.767
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.765
Bra007056 Brassica rapa Bra007056 N 0.740
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.721
OBART12G01190 Oryza barthii OBART12G01190 N 0.704
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.704
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.704