CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa001546mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa001546mg
T201260_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ07630
GRAS
431
791
LLTLLLQCAEAVSADNFDEATKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYASLPPSYVPISHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFADKLGLPFEFFPVAEKVGSLDPERLNISKREAVAVHWLQHSLYDVTGSDSNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEVKFHNWREKFQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm002956
Prunus mume
Pm002956
N
0.997
MDP0000397638
Malus domestica
MDP0000397638
N
0.970
gene13644-v1.0-hybrid
Fragaria vesca
gene13644-v1.0-hybrid
N
0.961
PK22310.1
Cannabis sativa
PK22310.1
N
0.939
cassava25218.valid.m1
Manihot esculenta
cassava25218.valid.m1
N
0.936
30073.m002204
Ricinus communis
30073.m002204
N
0.933
cassava36326.valid.m1
Manihot esculenta
cassava36326.valid.m1
N
0.933
Ciclev10011085m.g
Citrus clementina
Ciclev10011085m.g
N
0.933
orange1.1g014896m.g
Citrus sinensis
orange1.1g014896m.g
N
0.933
SCR
Vitis vinifera
VIT_08s0056g00050
N
0.930
POPTR_0016s15060
Populus trichocarpa
POPTR_0016s15060
N
0.928
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
0.925
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
0.920
TCM_017746
Theobroma cacao
TCM_017746
N
0.916
POPTR_0006s11500
Populus trichocarpa
POPTR_0006s11500
N
0.911
Cla012346
Citrullus lanatus
Cla012346
N
0.909
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
0.906
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
0.906
SapurV1A.1165s0100
Salix purpurea
SapurV1A.1165s0100
N
0.900
GLYMA09G40620
Glycine max
GLYMA09G40620
N
0.899
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.898
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
0.895
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
0.892
Bra007056
Brassica rapa
Bra007056
N
0.891
SCR
Arabidopsis thaliana
AT3G54220
N
0.889
Bo8g083500
Brassica oleracea
Bo8g083500
N
0.889
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.889
PGSC0003DMG400016833
Solanum tuberosum
PGSC0003DMG400016833
N
0.889
Ca_09530
Cicer arietinum
Ca_09530
N
0.889
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.889
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.889
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.889
Eucgr.K01320
Eucalyptus grandis
Eucgr.K01320
N
0.888
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.886
Gorai.006G236200
Gossypium raimondii
Gorai.006G236200
N
0.886
Thhalv10010179m.g
Eutrema salsugineum
Thhalv10010179m.g
N
0.886
Aquca_004_00566
Aquilegia coerulea
Aquca_004_00566
N
0.883
mgf012242m
Mimulus guttatus
mgf012242m
N
0.870
Gorai.005G001300
Gossypium raimondii
Gorai.005G001300
N
0.866
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.848
OGLUM12G01020
Oryza glumaepatula
OGLUM12G01020
N
0.844
TRIUR3_28106
Triticum urartu
TRIUR3_28106
N
0.841
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
0.839
Pavir.J19041
Panicum virgatum
Pavir.J19041
N
0.838
OBART12G01190
Oryza barthii
OBART12G01190
N
0.831
OGLUM11G01180
Oryza glumaepatula
OGLUM11G01180
N
0.831
OLONG_010321
Oryza longistaminata
OLONG_010321
N
0.831
Sb05g001500
Sorghum bicolor
Sb05g001500
N
0.828
BGIOSGA034703
Oryza indica
BGIOSGA034703
N
0.825
BGIOSGA036912
Oryza indica
BGIOSGA036912
N
0.825
ORUFI12G01460
Oryza rufipogon
ORUFI12G01460
N
0.825
SCR1
Oryza sativa
OS11G0124300
N
0.825
SCR2
Oryza sativa
OS12G0122000
N
0.825
Traes_4DS_2CE9E3235
Triticum aestivum
Traes_4DS_2CE9E3235
N
0.820
LPERR12G01340
Leersia perrieri
LPERR12G01340
N
0.818
Traes_4BS_A05D3DC53
Triticum aestivum
Traes_4BS_A05D3DC53
N
0.817
Traes_5DL_3EC609F62
Triticum aestivum
Traes_5DL_3EC609F62
N
0.817
BRADI4G44090
Brachypodium distachyon
BRADI4G44090
N
0.815
Pavir.J21588
Panicum virgatum
Pavir.J21588
N
0.812
AMTR_s00077p00190160
Amborella trichopoda
AMTR_s00077p00190160
N
0.810
OBART11G01460
Oryza barthii
OBART11G01460
N
0.809
ORGLA12G0010300
Oryza glaberrima
ORGLA12G0010300
N
0.806
F775_14336
Aegilops tauschii
F775_14336
N
0.804
ORGLA11G0013300
Oryza glaberrima
ORGLA11G0013300
N
0.804
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
0.803
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.801
Lus10016496.g
Linum usitatissimum
Lus10016496.g
N
0.798
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
0.798
MLOC_64716
Hordeum vulgare
MLOC_64716
N
0.792
GRMZM2G015080
Zea mays
GRMZM2G015080
N
0.790
Pavir.J08573
Panicum virgatum
Pavir.J08573
N
0.784
Pavir.Ha01915
Panicum virgatum
Pavir.Ha01915
N
0.758
Pavir.J23622
Panicum virgatum
Pavir.J23622
N
0.758
SELMODRAFT_432115
Selaginella moellendorffii
SELMODRAFT_432115
N
0.735
OB07G24850
Oryza brachyantha
OB07G24850
N
0.719
OS07G0567700
Oryza sativa
OS07G0567700
N
0.719