CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G44090
(
Brachypodium distachyon
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BRADI4G44090
T200060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G44090.1
GRAS
1
253
MQGLQWPGLFHILASRPGGPPRVRLTGLGASMDALEATGKRLSDFADTLGLPFEFCAVADKAGNLDPEKLLNGGGGGGGGVGRRREAVAVHWLHHSLYDVTGNDANTLGLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDAKFVGSWRDKLARSGFGPASLAGSAAAQAALLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Brachypodium distachyon
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
0.969
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.947
Pavir.J19041
Panicum virgatum
Pavir.J19041
N
0.930
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
0.926
TRIUR3_28106
Triticum urartu
TRIUR3_28106
N
0.924
Traes_5DL_3EC609F62
Triticum aestivum
Traes_5DL_3EC609F62
N
0.921
MLOC_64716
Hordeum vulgare
MLOC_64716
N
0.914
OGLUM12G01020
Oryza glumaepatula
OGLUM12G01020
N
0.910
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.909
MLOC_79758
Hordeum vulgare
MLOC_79758
N
0.901
Pavir.J21588
Panicum virgatum
Pavir.J21588
N
0.896
F775_14336
Aegilops tauschii
F775_14336
N
0.888
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
0.827
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
0.823
PRUPE_ppa001546mg
Prunus persica
PRUPE_ppa001546mg
N
0.815
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
0.807
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
0.802
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.802
SCR
Arabidopsis thaliana
AT3G54220
N
0.798
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.798
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.798
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.798
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.798
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.798
Bo8g083500
Brassica oleracea
Bo8g083500
N
0.794
ONIVA11G01600
Oryza nivara
ONIVA11G01600
N
0.794
OPUNC11G01240
Oryza punctata
OPUNC11G01240
N
0.794
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
0.790
mgf012242m
Mimulus guttatus
mgf012242m
N
0.790
PK22310.1
Cannabis sativa
PK22310.1
N
0.788
Ca_09530
Cicer arietinum
Ca_09530
N
0.786
Cla012346
Citrullus lanatus
Cla012346
N
0.778
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
0.778
OB07G24850
Oryza brachyantha
OB07G24850
N
0.750
OS07G0567700
Oryza sativa
OS07G0567700
N
0.750
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
0.749
LPERR12G01340
Leersia perrieri
LPERR12G01340
N
0.716
OBART12G01190
Oryza barthii
OBART12G01190
N
0.716
OGLUM11G01180
Oryza glumaepatula
OGLUM11G01180
N
0.716
OLONG_010321
Oryza longistaminata
OLONG_010321
N
0.716