AMTR_s00077p00190160 (Amborella trichopoda)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AMTR_s00077p00190160 T199800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN04319 GRAS 395 751

Links

Other GRAS family TFs
Other Amborella trichopoda TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.875
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.821
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.818
SCR Vitis vinifera VIT_08s0056g00050 N 0.812
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.811
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.811
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.810
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.810
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.810
Cla012346 Citrullus lanatus Cla012346 N 0.807
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.807
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.805
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.804
Pm002956 Prunus mume Pm002956 N 0.801
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.799
TCM_017746 Theobroma cacao TCM_017746 N 0.799
PK22310.1 Cannabis sativa PK22310.1 N 0.799
MDP0000397638 Malus domestica MDP0000397638 N 0.798
30073.m002204 Ricinus communis 30073.m002204 N 0.797
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.796
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.796
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.792
SCR Arabidopsis thaliana AT3G54220 N 0.790
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.790
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.790
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.790
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.790
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.790
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.790
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.790
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.788
Bo8g083500 Brassica oleracea Bo8g083500 N 0.787
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.787
Ca_09530 Cicer arietinum Ca_09530 N 0.787
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.784
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.784
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.784
SCR2 Oryza sativa OS12G0122000 N 0.784
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.784
mgf012242m Mimulus guttatus mgf012242m N 0.784
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.783
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.782
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.781
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.781
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.781
OBART12G01190 Oryza barthii OBART12G01190 N 0.780
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.780
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.776
SCR1 Oryza sativa OS11G0124300 N 0.776
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.773
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.773
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.773
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.767
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.765
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.762
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.760
OBART11G01460 Oryza barthii OBART11G01460 N 0.759
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.756
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.756
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.749
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.747
F775_14336 Aegilops tauschii F775_14336 N 0.738
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.737
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.734
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.731
OB07G24850 Oryza brachyantha OB07G24850 N 0.719
OS07G0567700 Oryza sativa OS07G0567700 N 0.719