CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB12G11340
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB12G11340
T200627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB12G11340.1
GRAS
1
132
MVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFHVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
1.000
OB11G11140
Oryza brachyantha
OB11G11140
N
1.000
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.985
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.955
MLOC_79758
Hordeum vulgare
MLOC_79758
N
0.917
Pavir.J19041
Panicum virgatum
Pavir.J19041
N
0.887
Pavir.J21588
Panicum virgatum
Pavir.J21588
N
0.818
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.803
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.803
SCR
Arabidopsis thaliana
AT3G54220
N
0.795
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.795
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.795
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.795
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.795
Ca_09530
Cicer arietinum
Ca_09530
N
0.788
Traes_2AS_455BD2CA1
Triticum aestivum
Traes_2AS_455BD2CA1
N
0.727
OB07G24850
Oryza brachyantha
OB07G24850
N
0.719
OS07G0567700
Oryza sativa
OS07G0567700
N
0.719