RLT2 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT5G44180 T204530_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.665 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G44180.1 Homeodomain 18 74
AT5G44180.2 Homeodomain 18 74
AT5G44180.3 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAC_09592 Metarhizium acridum MAC_09592 N 0.000
Mycgr3G72378 Zymoseptoria tritici Mycgr3G72378 N 0.000
PV09_03952 Verruconis gallopava PV09_03952 N 0.000
estExt_Genewise1Plus.C_chr_51033 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_51033 N 0.000