ENSAMXG00000000069 (Astyanax mexicanus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMXG00000000069 T206988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.865 0.927
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.865 0.927
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.865 0.927
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.865 0.927
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.865 0.927
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.865 0.927
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.865 0.927
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.865 0.927
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.864 0.945
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.864 0.945
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.864 0.945
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.864 0.945
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.864 0.945
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.864 0.945
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.864 0.945
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.864 0.945
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.864 0.945
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.864 0.945
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.864 0.945
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.864 0.945
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.864 0.945
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.864 0.945
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.864 0.945
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.864 0.945
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.864 0.945
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.864 0.945
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.708 0.727
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.708 0.727
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.708 0.727
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.708 0.727
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.708 0.727
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.708 0.691
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.708 0.691
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.708 0.691
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.708 0.691
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.708 0.691
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.708 0.673
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.708 0.673
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.708 0.673
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.708 0.673
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.664 0.600
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000000066 Homeodomain 127 181

Links

Other Homeodomain family TFs
Other Astyanax mexicanus TFs

540 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I
SINV17750 Solenopsis invicta SINV17750 I
TBX5 Vicugna pacos ENSVPAG00000009445 I
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I
Bm3498 Brugia malayi Bm3498 I
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I
TBX15 Bos taurus ENSBTAG00000007767 I
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I
DICVIV_10715 Dictyocaulus viviparus DICVIV_10715 N
ANCDUO_24135 Ancylostoma duodenale ANCDUO_24135 N
ANCDUO_27140 Ancylostoma duodenale ANCDUO_27140 N
CGOC_0001264301 Cylicostephanus goldi CGOC_0001264301 N
GPUH_0002190501 Gongylonema pulchrum GPUH_0002190501 N
DME_0000818901 Dracunculus medinensis DME_0000818901 N
ECANG7_07880 Echinococcus canadensis ECANG7_07880 N
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N
EVEC_0000447801 Enterobius vermicularis EVEC_0000447801 N
AMIN000991 Anopheles minimus AMIN000991 N
ANCDUO_22568 Ancylostoma duodenale ANCDUO_22568 N
ANCDUO_17822 Ancylostoma duodenale ANCDUO_17822 N
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N
PPAI007567 Phlebotomus papatasi PPAI007567 N
PPAI002123 Phlebotomus papatasi PPAI002123 N
BGLB011455 Biomphalaria glabrata BGLB011455 N
ASTEI10438 Anopheles stephensi ASTEI10438 N
AQUA010449 Anopheles quadriannulatus AQUA010449 N
AQUA000257 Anopheles quadriannulatus AQUA000257 N
ACUA028082 Anopheles culicifacies ACUA028082 N
OFLC_0001184101 Onchocerca flexuosa OFLC_0001184101 N
TRE_0001207201 Trichobilharzia regenti TRE_0001207201 N
TELCIR_17829 Teladorsagia circumcincta TELCIR_17829 N
SVUK_0001851801 Strongylus vulgaris SVUK_0001851801 N
SVE_1701500 Strongyloides venezuelensis SVE_1701500 N
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N
SMUV_0000075501 Syphacia muris SMUV_0000075501 N
SMTD_0001100101 Schistosoma mattheei SMTD_0001100101 N
PXEA_0001803801 Protopolystoma xenopodis PXEA_0001803801 N
HCOI01136500 Haemonchus contortus HCOI01136500 N
OESDEN_07954 Oesophagostomum dentatum OESDEN_07954 N
OESDEN_02780 Oesophagostomum dentatum OESDEN_02780 N
nOo.2.0.1.g12879 Onchocerca ochengi nOo.2.0.1.g12879 N
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N
NECAME_19347 Necator americanus NECAME_19347 N
NECAME_11635 Necator americanus NECAME_11635 N
NBR_0001177301 Nippostrongylus brasiliensis NBR_0001177301 N
NBR_0000542501 Nippostrongylus brasiliensis NBR_0000542501 N
L892_g20532 Steinernema scapterisci L892_g20532 N
L596_g4935 Steinernema carpocapsae L596_g4935 N
GF19461 Drosophila ananassae FBgn0096470 N
Smp_156650 Schistosoma mansoni Smp_156650 N
SINV20004 Solenopsis invicta SINV20004 N
PPA14512 Pristionchus pacificus PPA14512 N
L798_14238 Zootermopsis nevadensis L798_14238 N
L798_01365 Zootermopsis nevadensis L798_01365 N
KGM_15500 Danaus plexippus KGM_15500 N
ISCW019287 Ixodes scapularis ISCW019287 N
HMEL004264 Heliconius melpomene HMEL004264 N
GD16691 Drosophila simulans FBgn0188280 N
GG18707 Drosophila erecta FBgn0110916 N
YQE_06268 Dendroctonus ponderosae YQE_06268 N
ENSXMAG00000005990 Xiphophorus maculatus ENSXMAG00000005990 N
CBG08000 Caenorhabditis briggsae CBG08000 N
BGIBMGA012898 Bombyx mori BGIBMGA012898 N
BGIBMGA006719 Bombyx mori BGIBMGA006719 N
BGIBMGA003174 Bombyx mori BGIBMGA003174 N
Aqu1.211340 Amphimedon queenslandica Aqu1.211340 N
AGAP011712 Anopheles gambiae AGAP011712 N
ACEP18777 Atta cephalotes ACEP18777 N
ACEP16128 Atta cephalotes ACEP16128 N
LDEC010813 Leptinotarsa decemlineata LDEC010813 N
AFUN010567 Anopheles funestus AFUN010567 N
AFUN001004 Anopheles funestus AFUN001004 N
AEPI004511 Anopheles epiroticus AEPI004511 N
ACEP16054 Atta cephalotes ACEP16054 N
ACUA018702 Anopheles culicifacies ACUA018702 N
ACUA008906 Anopheles culicifacies ACUA008906 N
ACHR009374 Anopheles christyi ACHR009374 N
AARA011013 Anopheles arabiensis AARA011013 N
AALB008493 Anopheles albimanus AALB008493 N
SNAPOd2T00025688001 Oikopleura dioica SNAPOd2T00025688001 N
AMEM014364 Anopheles merus AMEM014364 N
LCUP008640 Lucilia cuprina LCUP008640 N
HHAL010563-PA Halyomorpha halys HHAL010563-PA N
Ocbimv22013221m.g Octopus bimaculoides Ocbimv22013221m.g N
Tal_R010698 Tyto alba Tal_R010698 N
Ogr11253 Ophisaurus gracilis Ogr11253 N
Hsal_09269--XP_394607.3_APIME Harpegnathos saltator Hsal_09269--XP_394607.3_APIME N
Cflo_02417--XP_001121225.1_APIME Camponotus floridanus Cflo_02417--XP_001121225.1_APIME N
Alligator_sinensis_CCG010046.1 Alligator sinensis Alligator_sinensis_CCG010046.1 N
YQE_10906 Dendroctonus ponderosae YQE_10906 N